No. | Type | Location | Region | Repeat unit | Period size (bp) | Copy number |
---|---|---|---|---|---|---|
1 | T | trnS-GCU and trnG-GCC | LSC | TACATTAAACAATATTAAAT | 20 | 2 |
2 | D | psbI and trnG-GCC psbE and petL | LSC | TAAAAATATATATATATATATAAATATATTATAGTA | 36 | 2 |
3 | T | accD and psaI | LSC | TAATTAAGATAGACAA | 16 | 2 |
4 | T | accD and psaI | LSC | TTTTCATAAGAAAACTCCT | 18 | 2 |
5 | T | accD and psaI | LSC | ATTTGAGATTTCCAAATAATA | 20 | 2 |
6 | P | accD and psaI | LSC | GTATAATATGAAGTTTGAATAT | 22 | 2 |
7 | T | clpP (intron) | LSC | TTAGGACAAAATTGTATCTC | 20 | 2 |
8 | T | clpP (intron) | LSC | AGTAATAGTAGGTATAA | 17 | 3 |
9 | T | ndhB and trnL-CAA | IRA | GTCATTCAAGCGTAT | 15 | 2 |
10 | T | ndhC and trnV-UAC | LSC | ATTCTAAATAATAAAAG | 17 | 2 |
11 | T | ndhF and rpl32 | SSC | TATTTATTAGATTTTGC | 16 | 2 |
12 | T | ndhF and rpl33 | SSC | TCGGAAATCTTATGATACTCCTT | 23 | 2 |
13 | T | petD (intron) | LSC | TTATATGGGTTTATTTCTGTTA | 22 | 2 |
14 | P | petN and psbM | LSC | CTAAAGAGTGGTAGAAAGGACTA | 24 | 2 |
15 | D | psaB (CDS) and psaA (CDS) | LSC | TGCAATAGCTAAATGATGATGAGCAATATCGGTCA | 34 | 2 |
16 | P | psbA | LSC | AAAAAATACCCAATATCTTGT | 21 | 2 |
17 | P | psbT and psbH | LSC | ATTGAAGTAATGAGCCTCCCA | 21 | 2 |
18 | T | rbcL and accD | LSC | TATATACAAG | 10 | 5 |
19 | T | rpoC2 (CDS) | LSC | TGTCTCATGTAAATT | 15 | 2 |
20 | T | rps11 (CDS) | LSC | TACGCCCATTCTTACGTGAACCAA | 24 | 2 |
21 | P | trnD-GUC and trnE-UUC | LSC | TTTCATGATACTTTACTTA | 19 | 2 |
22 | T | trnF-GAA and ndhJ | LSC | TATTCTATTTCGTCA | 15 | 2 |
23 | T | trnL-CAA ndhB | IRB | ACATACGCTTGAATG | 15 | 2 |
24 | P | ycf1 (CDS) | SSC | TTTTATTTTGACTTGTATTTTTAT | 22 | 2 |
25 | T | ycf15 and trnL-CAA | IRB | GAATAACTAAAGAAAATAGATA | 22 | 2 |
26 | T | ycf15 and trnL-CAA | IRA | TCTATCTATTTTCTTTACTTAT | 22 | 2 |
27 | T | ycf2 (CDS) | IRB | TTTGTCCAAGTCACTTCTCTT | 21 | 3 |
28 | T | ycf2 (CDS) | IRB/IRA | CTTTTTGTCCAAGTCACTTCC | 21 | 3 |
29 | T | ycf2 (CDS) | IRB/IRA | GATATCGATATTGATGATAGTGAC | 24 | 2 |
30 | T | ycf2 (CDS) | IRA | GAAGTGACTTGGACAAAAAGA | 21 | 3 |
31 | D/P | ycf3 (intron) petB (intron) rps12 and trnV-GAC | LSC/IRA/IRB | CCAGAACCGTACATGAGATTTTCATCTCATACGGCTCCTC | 39 | 3 |