Table 1 Protein identification search results from the MS/MS data of trichome-enriched A. annua sample material
Target database | # of protein family hits | # of peptides matched above identity threshold in target database | # of peptides matched above identity threshold in decoy database | FDR |
|---|---|---|---|---|
York Artemis contigs (116,303 sequences) | 671 | 3072 | 58 | 1.9 % |
Artemisia trichome Trinity contigs (150,282 sequences) | 684 | 2636 | 85 | 3.2 % |
NCBInr viridiplantae (1,079,491 sequences) | 419 | 1286 | 60 | 4.7 % |
UniProt A. annua (118 sequences) | 17 | 179 | 11 | 6.2 % |
UniProt viridiplantae (32,329 sequences) | 319 | 1271 | 112 | 8.8 % |