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Table 1 Basic information for sequence characters and best-fit model of Bayesian information criterion (BIC) for Bayesian inference

From: Towards a comprehensive phylogeny of the large temperate genus Pedicularis (Orobanchaceae), with an emphasis on species from the Himalaya-Hengduan Mountains

Parameters nrITS Chloroplast genes Total
matK rbcL trnL-F Concatenated dataset
No. of accessions (Pedicularis) 341 (326) 327 (314) 321 (309) 322 (307) 343 (328) 352 (337)
Aligned length (bp) 680 777 654 1577 2942 3622
Variable sites/Parsimony informative sites       
Pedicularis + outgroups 459/377 427/394 167/99 702/433 1296/836 1755/1213
Pedicularis 428/336 377/267 133/87 619/395 1129/749 1577/1085
BIC model GTR + I + G TVM + G TPM1uf + I + G TPM1uf + G -- --
-lnL 22752.7454 10062.8110 3971.1126 14883.0839 -- --
K 690 662 649 648 -- --
Frequency A 0.2147 0.3710 0.2661 0.3534 -- --
Frequency C 0.2449 0.1707 0.2195 0.1775 -- --
Frequency G 0.2362 0.1553 0.2082 0.1546 -- --
A↔C 0.9173 1.1879 1.0000 1.0000 -- --
A↔G 1.6908 2.5747 3.4921 1.8897 -- --
A↔T 1.3062 0.1754 0.4321 0.4951 -- --
C↔G 0.3371 0.7679 0.4321 0.4951 -- --
C↔T 2.8586 2.5747 3.4921 1.8897 -- --
G↔T 1.0000 1.0000 1.0000 1.0000 -- --
Gamma distribution shape parameter of variable sites 0.9960 0.7910 0.7000 0.7790 -- --
Proportion of invariable sites 0.2540 0.0000 0.5790 0.0000 -- --