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Table 3 Differentially expressed alleles between tolerant and sensitive accessions

From: RNA-Seq analysis identifies genes associated with differential reproductive success under drought-stress in accessions of wild barley Hordeum spontaneum

Contig Gene ID Gene Description POS Chr REF ALT QUAL Effect B1K0412 B1K3516 B1K3615 B1K4620
morex_contig_53956 MLOC_67950.1 GPI mannosyltransferase 7720 5HL A G 243 Moderate 1/1 0/0 1/1 0/0
morex_contig_65282 AK362742 Dehydrogenase/ reductase 3352 6HS C T 28.6 Low 1/1 0/0 1/1 0/0
morex_contig_1575714 AK368692 Vacuolar protein 4665 6HL C T 80.4 Modifier 1/1 0/0 1/1 0/0
morex_contig_1734244 AK370720 unknown protein 82 7HL A T 48.8 High 1/1 0/0 1/1 0/0
  1. Candidate variants after filtering for heterozygosity and including only non-reference alleles associated with drought tolerance. The contig name in the Morex assembly is indicated, the annotated gene (Gene ID), variant position within contig (POS), chromosome arm (Chr), the reference (REF) and alternative (ALT) variants, the phred-quality (QUAL), the variant impact (Effect), and the genotype of each accession