Skip to main content

Table 2 Summary of transcript assemblies and annotations for each of the four accessions analyzed

From: RNA-Seq analysis identifies genes associated with differential reproductive success under drought-stress in accessions of wild barley Hordeum spontaneum

Accession ID

Average number of aligned reads (sd)

Average coverage (sd)

Isoforms

SNPs

Introns

Exons

B1K0412

47,259,206 (5,881,069)

69.96 (11.16)

152,061

227,441

149,604

323,806

B1K3516

51,879,703 (14,491,956)

66.83 (10.55)

156,474

225,007

151,973

330,710

B1K3615

53,149,174 (13,822,620)

78.18 (16.11)

156,951

230,152

151,794

330,838

B1K4620

45,748,092 (11,603,178)

70.01 (6.08)

155,644

229,505

151,416

329,419

  1. For each accession the average number of aligned reads and coverage from the corresponding four libraries (two drought and two control) and standard deviations are indicated