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Table 2 Unigene set and functional annotation of P. ginseng root transcriptome

From: Comprehensive analysis of Panax ginseng root transcriptomes

Unigene assembly

 

No. of transcripts in initial assembly

486,622

No. of transcripts in filtered assembly

232,702

No. of transcripts in Nr unigene set

55,949

Max sequence length (bp)

20,589

Average sequence length (bp)

1,250

N50 length (bp)

1,998

Functional annotation

 

Protein database

% of Nr unigenes

NCBI Nr

94.0

Swiss-Prot

75.6

TAIR (A. thaliana)

80.6

Tomato (S. lycopersicum)

84.5

Potato (S. tuberosum L.)

81.8