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Table 5 Significant blasted proteins related to drought stress or leaf senescence

From: Identification of genomic regions involved in tolerance to drought stress and drought stress induced leaf senescence in juvenile barley

Protein (Top BlastX hit with p <10−5 or query cover >80 %) Protein abbr. Accession Functiona Markerb Chr.b Pos. in cMb Traitc Treat.d
Protease Do-like DEGP2 [Swiss-Prot:O82261.2] ls BOPA1_8166-525 1H 47.5 BY C, DSI
Cullin-1 CUL1 [Swiss-Prot:Q94AH6.1] ls SCRI_RS_85918 1H 47.7 BY C
Serine/threonine-protein phosphatase PP1 isozyme 3 TOPP1 [Swiss-Prot:P48483.1] ds SCRI_RS_17924 1H 47.7 BY C, DSI
Electron transfer flavoprotein-ubiquinone oxidoreductase ETFQO [Swiss-Prot:O22854.1] ls SCRI_RS_132604 1H 48.4 BY C, DSI
ATP-dependent zinc metalloprotease FTSH3 [Swiss-Prot:Q84WU8.1] ls BOPA1_2881-935 1H 81.7 BY S
ABC transporter G family member 43 ABCG43 [Swiss-Prot:Q7PC81.1] ds BOPA2_12_31319 1H 92.4 SPAD C, DSI
Probable pectinesterase 49 PME49 [Swiss-Prot:Q9LY18.1] ds SCRI_RS_235724 1H 95.8 CSS S
Sucrose synthase 4 SUS4 [Swiss-Prot:Q9M111.1] ls SCRI_RS_239231 2H 49.2 SPAD S
Metal-nicotianamine transporter YSL YSL2 [Swiss-Prot:Q6H3Z6.2] ds SCRI_RS_221886 2H 80.9 BY C
Glutamate dehydrogenase 2 GDH2 [Swiss-Prot:Q38946.1] ls BOPA1_3469-1152 2H 81.5 BY C
Probable glutamate carboxypeptidase 2 AMP1 [Swiss-Prot:Q9M1S8.3] ds SCRI_RS_156090 2H 81.5 BY, OA C, S
Probable phospholipid hydroperoxide glutathione peroxidase GPX1 [Swiss-Prot:O23968.1] ds BOPA1_1635-691 2H 89.8 BY S
Ethylene receptor 1 ETR1 [Swiss-Prot:Q9SSY6.1] ls SCRI_RS_185665 2H 114.9 BY C, DSI
Cullin-3A 3B CUL3A CUL3B [Swiss-Prot:Q9ZVH4.1] [Swiss-Prot:Q9C9L0.1] ls BOPA1_3608-2133 2H 129.7 BY C
Senescence-induced receptor-like serine/threonine-protein kinase SIRK [Swiss-Prot:O64483.1] ls SCRI_RS_8420 2H 139.9 BY C
Putative F-box/LRR-repeat protein 21 FBL21 [Swiss-Prot:Q9M0U8.1] ds SCRI_RS_115423 3H 36.3 OA S
1-aminocyclopropane-1-carboxylate oxidase ACO1 [Swiss-Prot:Q9ZQZ1.1] ds SCRI_RS_167825 3H 100.3 BY, OA C, S, DSI
Dehydrin DHN 3 [Swiss-Prot:P12948.1] ds BOPA1_ABC13753-1-2-167 3H 105.3 BY C
ABC transporter D family member 1 ABCA1 [Swiss-Prot:Q94FB9.1] ds SCRI_RS_142818 3H 148.2 BY C
Abscisic acid receptor PYL5 [Swiss-Prot:Q9FLB1.1] ds SCRI_RS_157396 4H 52.3 OA S
Ethylene-responsive transcription factor ERF011 [Swiss-Prot:Q9SNE1.1] ls SCRI_RS_9164 4H 113.7 BY C, DSI
Nucleotide pyrophosphatase/phosphodiesterase AVP1 [Swiss-Prot:Q687E1.2] ds BOPA1_9766-787 5H 44 BY S
Abscisic acid-inducible protein kinase TRIUR3 [Swiss-Prot:Q02066.1] ds SCRI_RS_102075 5H 44 SPAD S
Serine/threonine-protein kinase ATM [Swiss-Prot:Q75H77.1] ds BOPA1_ABC08327-1-1-353 5H 44 SPAD S
Serine/threonine-protein kinase SAPK9 [Swiss-Prot:Q75V57.1] ds SCRI_RS_102075 5H 44 SPAD S
Anthocyanin regulatory R-S protein R-S [Swiss-Prot:P13027.1] ds BOPA1_12045-83 5H 46.7 BY S
Fasciclin-like arabinogalactan protein 2 FLA2 [Swiss-Prot:Q9SU13.1] ds BOPA1_5004-375 5H 83.5 BY C
Serine/threonine-protein kinase ATM [Swiss-Prot:Q9M3G7.1] ds BOPA1_6315-914 5H 94.7 SPAD C
Dehydration-responsive element-binding protein 1A DREB1A [Swiss-Prot:Q64MA1.1] ds BOPA2_12_30852 5H 95 BY, OA C, S
Probable zinc metalloprotease EGY1 EGY1 [Swiss-Prot:Q852K0.3] ls SCRI_RS_208686 5H 137.4 BY C, DSI
Cation/H(+) antiporter 2 CHX [Swiss-Prot:Q9SAK8.1] ds SCRI_RS_160297 7H 2.1 ETR S
Ethylene-responsive transcription factor ERF062 [Swiss-Prot:Q9SVQ0.1] ls SCRI_RS_150783 7H 48.3 BY S
  1. aFunction of the proteins related to drought stress (ds) or leaf senescence (ls), given by UniProt
  2. bMarkers and chromosome positions are based on Comadran et al. (2012)
  3. cBY: biomass yield, CSS: total content of soluble sugars, ETR: electron transport rate at PSII, CFP: content of free proline, OA: osmolality, SPAD: leaf colour
  4. dC: control treatment, S: stress treatment, DSI: drought susceptibility index across treatments by Fischer & Maurer (1978)