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Table 2 Motif sequences indentified by MEME tools

From: Genome-wide analysis, expression profile of heat shock factor gene family (CaHsfs) and characterisation of CaHsfA2 in pepper (Capsicum annuum L.)

Motif

Width

Multilevel consensus sequence

1

50

FIVWDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWF

2

29

CHGNAPPPFLTKTYEMVDDPSTDDIISWN

3

26

LRGQKHLLCNIHRRKPWHNHSHQCCH

4

41

RQHQQGTDHQIQAMTERLQATEHRQQQMMSFLAKAMQNPGF

5

21

YEEEIERLKREKNVLMMELVK

6

20

VPTGVNDVFWEQFLTERPGC

7

24

DGQIVRYQPPMNEAAKALLQQICK

8

26

QIMQQKGKRKELEEAIRKKRRRPIDH

9

8

CVEVGKFG

10

42

LDESRSCADSPAMSYPQLDIDVGPKVSGIDMNSEPNGNPTPD

11

14

HMNNLAEQMGHLTS

12

48

HLMSDSGFPFNSCLSVMPEIQYSPTVVPGEAKVPQFPELDALNSQIDH

13

6

KKRRLP

14

19

LCGNIYNMMSNYNADCAEI

15

41

YQGHGIDRLDTLGRADFKRSETGNMPDIDTMQGIEDGVTTV

16

6

HKYWWN

17

17

LESSLTFWEHYLYDIDQ

18

29

DEIGSLAVEDGLDKEEDFPGVQESDWDKL

19

13

KCKELIDIVSMFA

20

11

PTMWIPQPMEG

21

12

GGTSPHISGVTL

22

20

CGGRGKMMKANDYYGPWMKM

23

11

IANIFISQLCK

24

15

AQLVHQQNESNRHIT

25

6

PHQYYY

  1. Motif numbers corresponded to the motifs in Fig. 1