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Table 1 M. truncatula , C. arietinum , G. max , L. angustifolius T2-RNases larger than 500 bp, that encode putative proteins not presenting in their amino acid sequence amino acid pattern 4 according to Vieira, et al. [28]

From: No evidence for Fabaceae Gametophytic self-incompatibility being determined by Rosaceae, Solanaceae, and Plantaginaceae S-RNase lineage genes

Locus

Gene code

IP

Intron number

Motif 1

Motif 2

Motif 4

Location

T. pratense

       

[GenBank:ASHM01010303] {

Tp1

9.20

1

FVIHGLWPSR

WPSLKYN

-

ASHM01010303: 956… 1742

[GenBank:ASHM01021082]

Tp2

8.82

1

FTIHGMWPSN

WPSYTSP

-

ASHM01021082: 467… 1277

[GenBank:ASHM01011821]

Tp3

7.57

1

FSVHGVWPTN

WPDLKGG

-

ASHM01011821: 2194… 2920

[GenBank:ASHM01032414]

Tp4

9.20

1

FVIHGLWPVF

WPSLKYN

-

ASHM01032414: 1330… 2116

[GenBank:ASHM01032369 ]+

Tp5

9.92

1

FTIHGLWPSN

WPNLKWT

-

ASHM01032369: 1121… 2019

[GenBank:ASHM01005450]

Tp6

9.18

1

FSLHGLWPSN

WPSLFVG

-

ASHM01005450: 3673… 4373

[GenBank:ASHM01035891]

Tp7

9.06

1

FTIHGLWPSN

WPNLLMV

-

ASHM01035891: 1083… 2003

[GenBank:ASHM01035915]

Tp8

9.51

1

FTLHGIWPSN

WPDLKGQ

-

ASHM01035915: 1152… 2109

[GenBank:ASHM01087496]

Tp9

8.11

1

FSIHGLWPQN

WPSLTGN

-

ASHM01087496: 1… 681

[GenBank:ASHM01016923]

Tp10

6.87

1

FSIHGLWPQN

WPSLTGK

-

ASHM01016923: 1540… 2300

[GenBank:ASHM01047800]

Tp11

9.48

1

FTTHGLWPSN

WPNLKGP

-

ASHM01047800:1… 629

[GenBank:ASHM01027928]

Tp12

8.75

1

FTIHGLWPSN

WPNLLSN

-

ASHM01027928:226… 1002

[GenBank:ASHM01008805]

Tp13

8.85

1

FSIHGLWPQN

WPSLTGN

-

ASHM01008805:250… 977

[GenBank:ASHM01049573]

Tp14

8.64

1

FTTHGLWPSN

WPNLKGP

-

ASHM01049573:1… 575

[GenBank:ASHM01036061] {

Tp15

9.20

1

FVIHGLWPSI

WPSLKYN

-

ASHM01036061: 956… 1742

M. truncatula

       

[GenBank:AC123571.8 (Medtr5g022810)]

Mt1

7.57

2

FVMHGLWPAN

WPDLLVY

-

Mt5:8,780,338..8,781,194

[GenBank:AC149207.1 (Medtr2g021830)]

Mt2

7.06

1

FTLHGLWPSN

WPNLFGA

-

Mt2:7,405,970..7,406,697

[GenBank:AC149207.2]

Mt3

8.57

2

FTVHGLWPSN

WPSVTTT

-

Mt2:7,383,161..7,384,370

[GenBank:AC149269.11 (Medtr6g090200)]

Mt4

6.39

1

FTIQGLFPNN

WINYIGD

-

Mt6:22,040,215..22,039,455

[GenBank:AC159124.1] >

Mt5

9.06

2

LTVHGLWPSN

WPDVGGT

-

Mt2:7,374,496..7,375,004

[GenBank:AC196855-3 (Medtr2g104330)] {

Mt8

8.05

1

FTLHGFWPSN

YPFDFNT

DFNTTK

Mt2:34,011,354..34,010,761

[GenBank:CR936945 (Medtr5g086410)]

Mt9

8.45

1

LTIRGLWPST

WPSLNSG

-

Mt5:36,330,498..36,331,243

[GenBank:CU459033 (Medtr5g086770)]

Mt10

5.78

2

FKIWGLWPVR

WPSLFGP

SLFGPD

Mt5:36,498,402..36,499,282

[GenBank:CT573354]

Mt12

8.83

1

FTIHGVWPSN

WPRLDTA

-

Mt3:9,158,726..9,157,789

[GenBank:CU026495]

Mt13

8.83

1

FTIHGLWPSN

WPRLDTA

-

Mt3:9,139,338..9,138,417

[GenBank:AC126012 (Medtr5g0977101)]

Mt14

5.20

1

FLLYGAWPVD

WRDIKNG

IKNGDD

Mt5:41,755,316..41,755,711

[GenBank:AC233685_48.1 (XM003637773)]

Mt16

9.21

1

FTIHGLWPTN

WPDVIHG

-

MtU:12,302,642..12,303,437

[GenBank:Medtr2g021910.2]

Mt17

8.54

2

LTIHGLWPSN

WPSIYGD

IYGDDD

Mt2:7,440,534..7,441,199

Mettr2g021910.2

Mt18

8.40

2

LTIHGLWPSN

WPTIYGS

IYGSDD

Mt2:7,445,004..7,445,674

[GenBank:AC124218 (XM003624084)]

Mt20

8.82

1

FTIHGLWVEN

WPSLYQK

LYQKSS

Mt7:22,479,456..22,480,238

[GenBank:CM001222 {

Mt23

9.55

1

FSIHGLWPTN

WPDAVYG

-

Mt6:12,596,544..12,596,922

BT148419]

Mt24

5.77

1

FTIHGLWPDY

WPSLSCG

-

MtT:10,244,733..10,244,880

[GenBank:BT136026 (AFK35821)]

Mt25

6.86

3

FTFILQWPGS

WPSLRCP

CPRLNN

Mt5:17,636,584..17,636,691

[GenBank:AW776643] >

Mt26

8.47

n.a

FGIHGLWPTN

WPNLLEW

-

-

C. arietinum

       

[GenBank:XP_004503396 (NC021165)]

Ca1

8.62

1

FTIHGLWPSN

WPNLKGQ

-

Ca6:2,486,865..2,487,892

[GenBank:CM001766.1]

Ca2

9.35

1

LTVHILWGTN

WNDHSFC

-

Ca3:9,734,288..9,735,009

[GenBank:XP_004486305 (CM001764.1)] {

Ca3

9.44

1

FTVHGLWPSN

WPNLFGN

-

Ca1:34,647,053..34,647,728

[GenBank:XP_004486305 (CM001764.1)]

Ca4

7.59

1

FTVHGLWPSN

WPNLFGN

-

Ca1:5,252,166..5,252,821

[GenBank:CM001767.4]

Ca5

8.47

1

FTIHGLWPYN

WPDLKGQ

-

Ca4:42,156,653..42,157,571

[GenBank:CM001767.3] {

Ca6

6.43

2

FIIHGLWPSN

WPNLKGQ

-

Ca4:3,880,028..3,880,839

[GenBank:CM001768.1] {

Ca7

9.02

1

FTIHGLWPSN

WSNLKGQ

-

Ca5:12,546,395..12,547,197

[GenBank:CM001768.2]

Ca8

9.24

1

FTIHGLWPFN

WPNLNGQ

-

Ca5:11,753,113..11,753,945

[GenBank:CM001769.1]

Ca9

9.28

1

FTIHGLWPNN

WPSLIKG

-

Ca6:45,431,765..45,432,712

[GenBank:XP_004505385 (CM001769.2)]

Ca10

8.85

1

FTIHGLWPSN

WPNLKGQ

-

Ca6:16,977,346..16,978,256

[GenBank:CM001769.4]

Ca11

8.61

1

FTLHGLWPSN

WPNLNGV

-

Ca6:31,097,283..31,098,019

[GenBank:CM001769.5] {

Ca12

7.79

1

FTIHGLWPSN

WPSLTMS

-

Ca6:28,777,475..28,778,149

[GenBank:CM001769.6] {

Ca13

9.03

1

FTLHGLWPSN

WPNLNGG

-

Ca6:33,284,148..33,284,935

[GenBank:CM001769.7] >

Ca14

8.27

1

KIIHGLWPSN

PSLTKSQ

-

Ca6:28,744,494..28,745,117

[GenBank:CM001769.8]

Ca15

8.80

1

FTIHGLWPSN

WPNLKGQ

-

Ca6:2,486,787..2,487,895

[GenBank:XP_004507007 (CM001769.9)]

Ca16

9.17

1

FTIHGLWGTN

WPDVINQ

-

Ca6:52,088,714..52,089,462

[GenBank:XP_004503396 (CM001769.10)]

Ca17

9.09

1

FTIHGLWPSN

WPNLKGQ

-

Ca6:2,486,751..2,487,895

[GenBank:XP_004505385 (CM001769.11)]

Ca18

8.85

1

FTIHGLWPSN

WPNLKGQ

-

Ca6:16,977,346..16,978,256

[GenBank:XP_004514375 (gi484567706)] >

Ca19

8.47

1

FTLHGLWPSN

WPNLNGV

-

scaffold485:91,749..192,162

[GenBank:XP_004506021 (gi484571392)]

Ca20

9.02

1

FKIHGLWPSN

WPSLIDS

-

Ca6:28,325,256..28,326,148

[GenBank:XP_004515186 (gi484566269)]

Ca21

9.16

1

FKIHGLWPNT

WPSLKKS

-

scaffold948:113,466..114,365

G. max

       

[GenBank:CM000836]

Gm1

9.05

1

FTIHGLWPQN

WPNLNTQ

-

GM03: 42522935… 42523824

[GenBank:XP_003548020)] {

Gm2

5.71

2

FTISYFRPRK

WPDLTTD

-

GM16: 30294108… 30295346

[GenBank:NP_001235172]

Gm3

6.80

2

FTISYLHPMR

WPDLRTD

-

GM02: 5707162… 5708520

[GenBank:XP_003519927]

Gm4

5.47

2

FTISYFRPRK

WPDLRTD

-

GM02: 5686955… 5688178

[GenBank:XP0035181161]

Gm5

7.49

2

FTISYLHPMR

WPDLRTD

-

GM02: 5682344… 5683625

[GenBank:XP003518119]

Gm6

6.30

2

FTISYLHPMR

WPDLRTD

-

GM02: 5698841… 5700244

[GenBank:CM000853]

Gm7

8.61

3

FSIHGLWPNF

WASLSCA

-

GM20:5212321… 5214271

L. angustifolius

       

[GenBank:AOCW01152977]

La1

9.04

0

FTLHGLWPIN

WPNLNGK

-

scaffold92513_2

  1. IP- isoelectric point.
  2. Underscored are amino acids that are not allowed in the motifs of [28].
  3. + sequences presenting stop codons in the putative coding region.
  4. { sequences where gaps were introduced to avoid stop codons in the putative coding region.
  5. > very divergent sequences that, although they present all the criteria of S-lineage S-RNase genes, were not included in phylogenetic analyses.