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Table 1 Statistics of raw and mapped read pairs from RNA-seq analysis of SC unpollination/self-pollination (SCUP/SCP) and SI unpollination/self-pollination (SIUP/SIP) styles

From: Dissection of the style’s response to pollination using transcriptome profiling in self-compatible (Solanum pimpinellifolium) and self-incompatible (Solanum chilense) tomato species

Sample ID Raw read pairs High-quality read pairs High-quality Percent Mapped read pairs Mapped Percent Unmapped read pairs Multi-mapped read pairs Multi-mapped Percent
SCP1 17000933 15215933 89.50% 13817410 90.80% 1398523 65920 0.50%
SCP2 16374027 14680679 89.66% 13485391 91.90% 1195288 59339 0.50%
SCP3 17667649 15893802 89.96% 14489321 91.20% 1404481 67431 0.50%
SCUP1 18248702 16320337 89.43% 14747316 90.40% 1573021 48233 0.30%
SCUP2 17346914 15557760 89.69% 14145517 90.90% 1412243 59543 0.40%
SCUP3 18986356 17021427 89.65% 15362024 90.30% 1659403 56730 0.40%
SIP1 15510971 13879490 89.48% 9431478 68.00% 4448012 32428 0.30%
SIP2 16845976 15163409 90.01% 10608995 70.00% 4554414 37544 0.40%
SIP3 16920459 15154474 89.56% 10396040 68.60% 4758434 43009 0.40%
SIUP1 17664280 15847493 89.71% 10885898 68.70% 4961595 29071 0.30%
SIUP2 17752773 15880716 89.45% 11004025 69.30% 4876691 31678 0.30%
SIUP3 18253204 16435260 90.04% 11232677 68.30% 5202583 31212 0.30%