Table 1 Raw, filtered and mapped reads used for the de novo assembly of the reference transcriptome library for adaxial epidermal cells of freshly harvested and cultured V. faba cotyledons undergoing trans -differentiation to a TC morphology
Category | Number | Percentage (compared with total number of reads) |
|---|---|---|
Raw reads | 181,419,640 | 100% |
Clean reads | 126,200,279 | 69.56% |
Mapped reads | 107,093,666 | 59.03% |
Uniquely-mapped reads | 44,339,744 | 24.44% |
Multiple-mapped reads | 62,753,921 | 34.59% |