S. No. | Primers name | Primer sequence (5' → 3') | PCR T m (°C) | Product size (bp) | Used for | Respond/Remarks |
---|---|---|---|---|---|---|
Primers pair 1 | ITS 1 | TCCGTAGGTGAACCTGCGG | 55 | ~800 | Identification of P. cajani by amplification of ITS sequence | Amplified and PCR products sequenced |
ITS 4 | TCCTCCGCTTATTGATATGC | |||||
Primers pair 2 | qPCR_F1 | CTTTCAGCAGTGGATGTCTAGG | 62 | 127 | qPCR quantification of P. cajani | Low reproducible results in qPCR |
qPCR_R1 | GACTAACCCGGAAGTGCAATA | |||||
Primer pair 3 | qPCR_F2 | CTGCGAGTCCCTTGAAATGTA | 62 | 146 | qPCR quantification of P. cajani | Consistence results in qPCR |
qPCR_R2 | ATACCGCGAATCGAACACTC | |||||
Primer pair 4 | qPCR_F3 | GGGACGAAAGTCTCTGCTTT | 62 | 110 | qPCR quantification of P. cajani | Low reproducible results in qPCR |
qPCR_R3 | CCTGCAATTCGCATTACGTATC |