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Table 1 Significantly up-regulated transporters in Li 1 and Li 2 mutants regardless of growth conditions

From: RNA-seq analysis of short fiber mutants Ligon-lintless-1 (Li 1 ) and – 2 (Li 2 ) revealed important role of aquaporins in cotton (Gossypium hirsutum L.) fiber elongation

Gene-subgenome/subcategory Li 1 /wt F Li 2 /wt F Li 2 /wt GH Description
Sugars
Gorai.007G292300_A 2.9 1.5 1.7 sugar:hydrogen symporter
Gorai.012G130400_A 2.5 2.3 1.5 mannitol transporter
Gorai.011G046300_D 1.7 1.6 1.9 inositol transporter 2
Gorai.005G139700_D 2.6 1.6 1.7 sucrose transporter 2
Amino acids
Gorai.009G126900_D 2.0 1.1 1.0 Inorganic H pyrophosphatase family
Gorai.013G148800_A 3.5 1.8 2.3 amino acid permease 7
Gorai.002G233100_D 1.0 1.3 2.1 aromatic and neutral transporter 1
Gorai.005G253300_D 1.3 1.4 1.2 amino acid permease
Gorai.013G148600_A 2.2 1.8 1.6 amino acid permease 7
Metabolite transporters at the envelope membrane
Gorai.007G313700_D 1.3 1.2 1.3 phosphate translocator 1
NDP-sugars at the ER     
Gorai.008G116300_A 4.2 2.1 1.4 UDP-galactose transporter 2
Metal
Gorai.007G173100_A 2.7 2.2 2.4 zinc transporter 5 precursor
Peptides and oligopeptides
Gorai.004G290200_D 4.3 3.4 4.1 Major facilitator superfamily protein
Gorai.008G190200_D 2.4 1.3 1.7 Major facilitator superfamily protein
Unspecified cations
Gorai.010G187200_D 3.0 1.3 1.8 tonoplast dicarboxylate transporter
Gorai.012G145500_A 1.4 1.1 1.0 Magnesium transporter CorA-like family
Potassium
Gorai.009G055600_D 2.5 1.4 1.5 K+ channel tetramerisation domain
ABC transporters
Gorai.007G310800_A 2.2 2.6 1.3 multidrug resistance-associated protein 3
Gorai.007G310800_D 2.8 2.9 2.0 multidrug resistance-associated protein 3
Gorai.007G310700_D 2.4 2.9 2.3 multidrug resistance-associated protein 3
Gorai.007G310600_A 2.3 2.6 1.4 multidrug resistance-associated protein 3
Gorai.007G310600_D 3.0 2.9 2.7 multidrug resistance-associated protein 3
Gorai.001G003100_D 1.7 2.8 1.9 pleiotropic drug resistance 10
Gorai.013G154800_D 1.3 2.2 1.6 multidrug resistance-associated protein 3
Gorai.007G070500_D 2.0 1.7 1.2 multidrug resistance protein
Calcium
Gorai.007G021200_D 1.5 1.4 1.4 CAX interacting protein 1
Gorai.013G148900_D 1.8 2.3 2.0 cation exchanger 2
Miscellaneous
Gorai.009G306300_D 1.6 1.7 1.2 Auxin efflux carrier family protein
Gorai.013G014100_D 2.8 3.1 2.8 Auxin efflux carrier family protein
Gorai.005G179100_A 2.3 1.2 1.7 MATE efflux family protein
Gorai.013G170200_A 2.6 1.8 1.3 MATE efflux family protein
Gorai.009G171800_A 1.8 1.0 1.1 secretory carrier 3
Gorai.009G208500_D 2.0 1.4 1.2 Xanthine/uracil permease family protein
Gorai.009G208500_A 2.3 1.3 1.3 Xanthine/uracil permease family protein
  1. Numbers represent the log base 2 ratio of mutants to wild-type expression; F, field grown plants; and GH, greenhouse grown plants.