Skip to main content

Table 1 Significantly up-regulated transporters in Li 1 and Li 2 mutants regardless of growth conditions

From: RNA-seq analysis of short fiber mutants Ligon-lintless-1 (Li 1 ) and – 2 (Li 2 ) revealed important role of aquaporins in cotton (Gossypium hirsutum L.) fiber elongation

Gene-subgenome/subcategory

Li 1 /wt F

Li 2 /wt F

Li 2 /wt GH

Description

Sugars

Gorai.007G292300_A

2.9

1.5

1.7

sugar:hydrogen symporter

Gorai.012G130400_A

2.5

2.3

1.5

mannitol transporter

Gorai.011G046300_D

1.7

1.6

1.9

inositol transporter 2

Gorai.005G139700_D

2.6

1.6

1.7

sucrose transporter 2

Amino acids

Gorai.009G126900_D

2.0

1.1

1.0

Inorganic H pyrophosphatase family

Gorai.013G148800_A

3.5

1.8

2.3

amino acid permease 7

Gorai.002G233100_D

1.0

1.3

2.1

aromatic and neutral transporter 1

Gorai.005G253300_D

1.3

1.4

1.2

amino acid permease

Gorai.013G148600_A

2.2

1.8

1.6

amino acid permease 7

Metabolite transporters at the envelope membrane

Gorai.007G313700_D

1.3

1.2

1.3

phosphate translocator 1

NDP-sugars at the ER

    

Gorai.008G116300_A

4.2

2.1

1.4

UDP-galactose transporter 2

Metal

Gorai.007G173100_A

2.7

2.2

2.4

zinc transporter 5 precursor

Peptides and oligopeptides

Gorai.004G290200_D

4.3

3.4

4.1

Major facilitator superfamily protein

Gorai.008G190200_D

2.4

1.3

1.7

Major facilitator superfamily protein

Unspecified cations

Gorai.010G187200_D

3.0

1.3

1.8

tonoplast dicarboxylate transporter

Gorai.012G145500_A

1.4

1.1

1.0

Magnesium transporter CorA-like family

Potassium

Gorai.009G055600_D

2.5

1.4

1.5

K+ channel tetramerisation domain

ABC transporters

Gorai.007G310800_A

2.2

2.6

1.3

multidrug resistance-associated protein 3

Gorai.007G310800_D

2.8

2.9

2.0

multidrug resistance-associated protein 3

Gorai.007G310700_D

2.4

2.9

2.3

multidrug resistance-associated protein 3

Gorai.007G310600_A

2.3

2.6

1.4

multidrug resistance-associated protein 3

Gorai.007G310600_D

3.0

2.9

2.7

multidrug resistance-associated protein 3

Gorai.001G003100_D

1.7

2.8

1.9

pleiotropic drug resistance 10

Gorai.013G154800_D

1.3

2.2

1.6

multidrug resistance-associated protein 3

Gorai.007G070500_D

2.0

1.7

1.2

multidrug resistance protein

Calcium

Gorai.007G021200_D

1.5

1.4

1.4

CAX interacting protein 1

Gorai.013G148900_D

1.8

2.3

2.0

cation exchanger 2

Miscellaneous

Gorai.009G306300_D

1.6

1.7

1.2

Auxin efflux carrier family protein

Gorai.013G014100_D

2.8

3.1

2.8

Auxin efflux carrier family protein

Gorai.005G179100_A

2.3

1.2

1.7

MATE efflux family protein

Gorai.013G170200_A

2.6

1.8

1.3

MATE efflux family protein

Gorai.009G171800_A

1.8

1.0

1.1

secretory carrier 3

Gorai.009G208500_D

2.0

1.4

1.2

Xanthine/uracil permease family protein

Gorai.009G208500_A

2.3

1.3

1.3

Xanthine/uracil permease family protein

  1. Numbers represent the log base 2 ratio of mutants to wild-type expression; F, field grown plants; and GH, greenhouse grown plants.