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Table 1 Significantly enriched pathways in cotton identified by KOBAS during leaf senescence (Corrected P-valueā€‰ā‰¤ā€‰0.05)

From: Global analysis of the Gossypium hirsutum L. Transcriptome during leaf senescence by RNA-Seq

KEGG id KEGG pathway name (down-regulated) Gene number Background number P-value Corrected p-value
ko00196 Photosynthesis - antenna proteins 22 31 5.70E-11 7.88E-09
ko00195 Photosynthesis 24 86 9.92E-06 4.02E-04
ko00860 Porphyrin and chlorophyll metabolism 16 65 9.33E-04 1.88E-02
ko00710 Carbon fixation in photosynthetic organisms 22 115 2.14E-03 3.88E-02
KEGG id KEGG pathway name (up-regulated) Gene number Background number P-value Corrected P-value
ko04626 Plant-pathogen interaction 42 231 4.55E-13 1.86E-11
ko04075 Plant hormone signal transduction 34 338 2.78E-05 4.74E-04
ko00062 Fatty acid elongation 8 38 6.84E-04 9.57E-03
ko00480 Glutathione metabolism 13 99 1.03E-03 1.37E-02
ko00430 Taurine and hypotaurine metabolism 4 11 3.16E-03 3.62E-02