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Table 2 Number of newly-identified exons/ASVs (including cassette exons and retained introns) in rice, maize, and sorghum

From: Comparative genomics of grass EST libraries reveals previously uncharacterized splicing events in crop plants

 

Newly-identified exons (ASVs)

Species

Genomic type

Cassette

Retained intron

Total

Rice

5′-UTR

36 (42)

8 (9)

44 (51)

 

CDS

214 (216)

70 (70)

284 (286)

 

3′-UTR

47 (38)

6 (7)

53 (45)

 

Total

297 (296)

84 (86)

381 (382)

Maize

5′-UTR

272 (324)

95 (104)

367 (428)

 

CDS

364 (367)

83 (85)

447 (452)

 

3′-UTR

202 (209)

134 (156)

336 (365)

 

Total

838 (900)

312 (345)

1,150 (1,245)

Sorghum

5′-UTR

242 (230)

53 (55)

295 (279)

 

CDS

672 (684)

224 (227)

896 (913)

 

3′-UTR

98 (78)

59 (62)

157 (140)

 

Total

1,012 (992)

336 (344)

1,348 (1,336)