Summary | Â | B. rapa | B. nigra | B. oleracea | B. napus | B. juncea | B. carinata |
---|---|---|---|---|---|---|---|
Raw Tag | Total | 6178564 | 5881618 | 6059222 | 5964594 | 6076830 | 5795234 |
Raw Tag | Distinct Tag | 293575 | 214427 | 243895 | 269285 | 400134 | 278768 |
Clean Tag | Total number | 6018254 | 5772449 | 5930726 | 5823113 | 5858527 | 5657697 |
Clean Tag | Distinct Tag number | 133499 | 106552 | 116771 | 128967 | 181965 | 142281 |
Tag Mapping to Gene | Total number | 1964909 | 1990442 | 1747843 | 2253347 | 1857572 | 1915305 |
Tag Mapping to Gene | Distinct Tag number | 44267 | 30413 | 36220 | 45358 | 56289 | 40425 |
Unambiguous Tag Mapping to Gene | Total number | 1679848 | 1635594 | 1475050 | 1924944 | 1531974 | 1594991 |
Unambiguous Tag Mapping to Gene | Total% of clean tag | 27.91% | 28.33% | 24.87% | 33.06% | 26.15% | 28.19% |
Unambiguous Tag Mapping to Gene | Distinct Tag number | 39414 | 26114 | 31933 | 40561 | 49892 | 35285 |
Unambiguous Tag Mapping to Gene | Distinct Tag% of clean tag | 29.52% | 24.51% | 27.35% | 31.45% | 27.42% | 24.80% |
Tag-mapped Genes | number | 19023 | 16687 | 18547 | 19955 | 21995 | 19436 |
Tag-mapped Genes | % of ref genes | 46.20% | 40.53% | 45.05% | 48.47% | 53.42% | 47.20% |
Unambiguous Tag-mapped Genes | number | 16574 | 13867 | 15970 | 17448 | 19424 | 16645 |
Unambiguous Tag-mapped Genes | % of ref genes | 40.25% | 33.68% | 38.79% | 42.38% | 47.18% | 40.43% |
Mapping to Genome | Total number | 2437918 | 1147106 | 2105332 | 2164464 | 2047451 | 1462061 |
Mapping to Genome | Total% of clean tag | 40.51% | 19.87% | 35.50% | 37.17% | 34.95% | 25.84% |
Mapping to Genome | Distinct Tag number | 44076 | 15159 | 30703 | 40689 | 50304 | 29547 |
Mapping to Genome | Distinct Tag% of clean tag | 33.02% | 14.23% | 26.29% | 31.55% | 27.64% | 20.77% |
Unknown Tag | Total number | 1615427 | 2634901 | 2077551 | 1405302 | 1953504 | 2280331 |
Unknown Tag | Total% of clean tag | 26.84% | 45.65% | 35.03% | 24.13% | 33.34% | 40.30% |
Unknown Tag | Distinct Tag number | 45156 | 60980 | 49848 | 42920 | 75372 | 72309 |
Unknown Tag | Distinct Tag% of clean tag | 33.82% | 57.23% | 42.69% | 33.28% | 41.42% | 50.82% |