Skip to main content

Table 1 List of putative histone chaperones identified from Arabidopsis showing their classification, predicted intracellular localization, and other biochemical properties

From: Histone chaperones in Arabidopsis and rice: genome-wide identification, phylogeny, architecture and transcriptional regulation

Family

Sub-family

Gene

Previous nomenclature (Gene symbol)

Protein

Locus id

pI/Mw (kDa)

Localization

NLS/NES

NAP

AtNAPL1

NAP1;1

AtNAPL1a

AT4G26110.2

4.33/41.6

Nuclear

+/-

AtNAPL1b

AT4G26110.1

4.38/42.9

Nuclear

+/-

AtNAPL2

NAP1;2

AtNAPL2a

AT2G19480.3

4.27/42.8

Nuclear

+/+

AtNAPL2b

AT2G19480.2

4.29/42.9

Nuclear

+/+

AtNAPL2c

AT2G19480.1

4.32/43.5

Nuclear

+/+

AtNAPL3

NAP1;3

AtNAPL3

AT5G56950.1

4.42/43.2

Nuclear

+/-

AtNAPL4

NAP1;4

AtNAPL4

AT3G13782.1

4.52/36.4

Nuclear

+/+

AtNAPL5

NRP2

AtNAPL5

AT1G18800.1

4.17/29.4

Nuclear

-/+

AtNAPL6

NRP1

AtNAPL6a

AT1G74560.1

4.22/29.4

Nuclear

-/+

AtNAPL6b

AT1G74560.2

4.22/29.5

Nuclear

-/+

AtNAPL6c

AT1G74560.3

5.22/30.6

Cytoplasmic

+/+

CAF1

CAF1A

AtCAF1AL

FAS1

ATCAF1ALa

AT1G65470.2

5.45/92.3

Nuclear

+/-

ATCAF1ALb

AT1G65470.1

5.49/93.3

Nuclear

+/-

CAF1B

AtCAF1BL

FAS2

ATCAF1BLa

AT5G64630.1

6.35/43.7

Nuclear

-/+

ATCAF1BLb

AT5G64630.2

5.99/54.1

Nuclear

-/-

ATCAF1BLc

AT5G64630.3

5.82/47.9

Nuclear

-/-

CAF1C

AtCAF1CL1

MSI1

AtCAF1CL1

AT5G58230.1

4.69/48.1

Nuclear

-/+

AtCAF1CL2

MSI3

AtCAF1CL2

AT4G35050.1

4.55/47.9

Nuclear

-/-

AtCAF1CL3

MSI2

AtCAF1CL3

AT2G16780.1

4.66/46.7

Cytoplasmic

-/-

AtCAF1CL4

FVE

AtCAF1CL4

AT2G19520.1

5.81/55.7

Nuclear

-/-

AtCAF1CL5

NFC5

AtCAF1CL5

AT4G29730.1

6.12/53.9

Nuclear

-/-

AtCAF1CL6

 

AtCAF1CL6

AT2G19540.1

4.89/51.4

Nuclear

-/-

SPT6

AtSPT6L1

GTB1

AtSPT6L1a

AT1G65440.3

5.88/166.3

Nuclear

+/+

GTB1

AtSPT6L1b

AT1G65440.2

5.12/185.8

Nuclear

+/+

GTB1

AtSPT6L1c

AT1G65440.1

5.08/185.0

Nuclear

+/+

AtSPT6L2

SPT6L

AtSPT6L2

AT1G63210.1

5.98/138.1

Nuclear

+/-

ASF1

AtASF1L1

ASF1B

AtASF1L1

AT5G38110.1

4.02/24.7

Nuclear

-/-

AtASF1L2

SGA1

AtASF1L2

AT1G66740.1

4.20/22.1

Nuclear

-/-

HIRA

AtHIRAL

HIRA

AtHIRALa

AT3G44530.2

6.26/114.3

Nuclear

+/+

AtHIRALb

AT3G44530.1

6.40/116.4

Nuclear

+/+

NASP

AtNASPL

 

AtNASPLa

AT4G37210.1

4.28/52.2

Cytoplasmic

-/+

 

AtNASPLb

AT4G37210.2

4.11/40.5

Nuclear

-/+

FACT

SSRP

AtSSRPL

HMG

AtSSRPL

AT3G28730.1

5.52/71.6

Nuclear

+/+

SPT16

AtSPT16L

GTFC

AtSPT16L

AT4G10710.1

5.70/120.5

Nuclear

+/-

  1. The alternative spliced forms have been named by suffixing lower case letters. pI = Isoelectric point (predicted), Mw = Molecular weight, NLS = Nuclear localization signal, NES = Nuclear export signal. ‘+ ’denotes present; ‘-’denotes absent. Note that most of the putative histone chaperones have their predicted pI in the acidic region.