From: Characterization of miRNAs associated with Botrytis cinerea infection of tomato leaves
miRNA name | Target | Cleave site | category | Target annotation |
---|---|---|---|---|
miRn1 | Solyc03g121180.2.1 | 816 | 3 | GDSL esterase/lipase At5g22810 |
miRn1 | Solyc03g123500.2.1 | 370 | 4 | Pathogenesis-related transcriptional factor and ERF, DNA-binding |
miRn1 | Solyc04g017620.2.1 | 363 | 3 | Phosphatidylinositol-4-phosphate 5-kinase 9 |
miRn1 | Solyc06g063070.2.1 | 447 | 3 | Pathogenesis-related transcriptional factor and ERF, DNA-binding |
miRn1 | Solyc09g008480.2.1 | 2181 | 2 | Phosphatidylinositol-4-phosphate 5-kinase 9 |
miRn3 | Solyc01g067070.2.1 | 959 | 3 | Mitochondrial deoxynucleotide carrier |
miRn3 | Solyc01g111600.2.1 | 494 | 3 | Metal ion binding protein |
miRn3 | Solyc03g115820.2.1 | 1115 | 2 | Ribulose-5-phosphate-3-epimerase |
miRn3 | Solyc03g118020.2.1 | 2483 | 2 | RNA-induced silencing complex |
miRn3 | Solyc06g008110.2.1 | 1236 | 2 | WD repeat-containing protein |
miRn3 | Solyc06g074720.2.1 | 324 | 4 | MKI67 FHA domain-interacting nucleolar phosphoprotein-like |
miRn3 | Solyc07g017500.2.1 | 1272 | 0 | Lateral signaling target protein 2 homolog |
miRn3 | Solyc07g047670.2.1 | 1347 | 2 | Pescadillo homolog 1 |
miRn3 | Solyc07g066650.2.1 | 887 | 3 | DCN1-like protein 2, Defective in cullin neddylation |
miRn3 | Solyc10g076250.1.1 | 948 | 2 | Aminotransferase like protein |
miRn3 | Solyc11g006680.1.1 | 2199 | 2 | Pentatricopeptide repeat-containing protein |
miRn4-2 | Solyc04g054480.2.1 | 4328 | 4 | C2 domain-containing protein-like |
miRn4-2 | Solyc10g005730.2.1 | 849 | 4 | WD-40 repeat family protein |
miRn5 | Solyc11g069570.1.1 | 306 | 3 | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG |
miRn5 | Solyc12g056800.1.1 | 575 | 2 | Oxidoreductase family protein |
miRn6 | Solyc01g009230.2.1 | 4003 | 2 | Xanthine oxidase |
miRn6 | Solyc02g072130.2.1 | 1191 | 3 | Protein transport protein SEC61 alpha subunit |
miRn6 | Solyc05g015680.1.1 | 144 | 4 | Serine/threonine-protein phosphatase 7 long form |
miRn6 | Solyc06g050650.1.1 | 489 | 3 | Serine/threonine-protein phosphatase 7 long form |
miRn6 | Solyc06g084000.2.1 | 417 | 2 | Heterogeneous nuclear ribonucleoprotein K |
miRn6 | Solyc07g042120.1.1 | 783 | 0 | Serine/threonine-protein phosphatase 7 long form |
miR159 | Solyc01g009070.2.1 | 967 | 0 | MYB transcription factor |
miR159 | Solyc05g053100.2.1 | 1088 | 4 | Dihydrolipoyl dehydrogenase |
miR159 | Solyc06g048730.2.1 | 1010 | 2 | Uroporphyrinogen decarboxylase |
miR159 | Solyc06g073640.2.1 | 997 | 0 | MYB transcription factor |
miR159 | Solyc10g083280.1.1 | 357 | 2 | evidence_code:10F0H1E1IEG 30S ribosomal protein S.1 |
miR159 | Solyc12g014120.1.1 | 472 | 2 | evidence_code:10F0H0E1IEG Unknown Protein |
miR160 | Solyc01g107510.2.1 | 1843 | 2 | DNA polymerase IV |
miR160 | Solyc06g075150.2.1 | 1280 | 0 | Auxin response factor 16 |
miR160 | Solyc09g007810.2.1 | 1364 | 4 | Auxin response factor 3 |
miR160 | Solyc11g010790.1.1 | 855 | 3 | Glucosyltransferase |
miR160 | Solyc11g010800.1.1 | 447 | 3 | Anthocyanidin 3-O-glucosyltransferase |
miR160 | Solyc11g010810.1.1 | 855 | 4 | Glucosyltransferase |
miR160 | Solyc11g013470.1.1 | 554 | 0 | Auxin response factor 17 (Fragment) |
miR160 | Solyc11g069500.1.1 | 1313 | 0 | Auxin response factor 16 |
miR169 | Solyc01g090420.2.1 | 1893 | 2 | Armadillo/beta-catenin repeat family protein |
miR1919 | Solyc03g111340.2.1 | 1215 | 4 | Ubiquitin-like modifier-activating enzyme 5 |
miR1919 | Solyc12g043020.1.1 | 1209 | 3 | evidence_code:10F0H1E1IEG Dihydroxy-acid dehydratase |
miR319 | Solyc06g068010.2.1 | 702 | 2 | Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
miR319 | Solyc08g048370.2.1 | 763 | 3 | Transcription factor CYCLOIDEA (Fragment) |
miR319 | Solyc08g048390.1.1 | 1025 | 2 | evidence_code:10F0H1E1IEG Transcription factor CYCLOIDEA (Fragment) |
miR394 | Solyc01g109400.2.1 | 488 | 3 | Flavoprotein wrbA |
miR394 | Solyc01g109660.2.1 | 298 | 2 | Glycine-rich RNA-binding protein |
miR394 | Solyc05g015520.2.1 | 1162 | 2 | F-box family protein |
miR394 | Solyc06g051750.2.1 | 1208 | 2 | Cytochrome P450″ |
miR394 | Solyc06g082220.2.1 | 707 | 3 | Tat specific factor.1 |
miR394 | Solyc12g044860.1.1 | 1328 | 2 | evidence_code:10F0H1E1IEG ATP dependent RNA helicase |
miR5300 | Solyc08g068870.2.1 | 679 | 2 | Aspartic proteinase nepenthesin.1 |
miR5300 | Solyc11g012970.1.1 | 265 | 2 | Aminoacylase.1 |