Table 5 Differential expression of transcripts annotated as transcription factors and kinases
Family | Unique in BHS and/or BDS | BDS | BHS | |||||
|---|---|---|---|---|---|---|---|---|
Transcripts identified | Differentially expressed transcripts | Up regulated | Down regulated | Total | Up regulated | Down regulated | Total | |
Transcription factors | ||||||||
MYB | 122 | 34 | 4 | 13 | 17 | 12 | 14 | 26 |
HSF | 39 | 24 | 7 | 2 | 9 | 21 | 2 | 23 |
ERF | 26 | 22 | 2 | 9 | 11 | 6 | 9 | 15 |
WRKY | 118 | 21 | 5 | 7 | 12 | 3 | 11 | 14 |
bHLH | 101 | 18 | 1 | 12 | 13 | 1 | 9 | 10 |
AP2 | 32 | 14 | 4 | 2 | 6 | 5 | 7 | 12 |
DREB | 15 | 11 | 9 | 0 | 9 | 10 | 0 | 10 |
JUMONJI | 37 | 8 | 0 | 7 | 7 | 0 | 4 | 4 |
GATA | 29 | 7 | 0 | 5 | 5 | 2 | 2 | 4 |
bZIP | 21 | 6 | 1 | 4 | 5 | 0 | 3 | 3 |
PLATZ | 21 | 4 | 3 | 0 | 3 | 1 | 0 | 1 |
TCP | 8 | 3 | 1 | 0 | 1 | 1 | 0 | 1 |
CCAAT | 48 | 2 | 0 | 1 | 1 | 0 | 1 | 1 |
HD | 5 | 2 | 0 | 1 | 1 | 0 | 1 | 1 |
SCARECROW | 5 | 1 | 0 | 1 | 1 | 0 | 1 | 1 |
GRAS | 5 | 1 | 1 | 0 | 1 | 1 | 0 | 1 |
NFY | 37 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
C2H2 | 22 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Kinases | ||||||||
Receptor-like kinases | 240 | 86 | 4 | 59 | 63 | 2 | 52 | 54 |
MAP kinases | 116 | 29 | 6 | 14 | 20 | 2 | 10 | 12 |
Casein kinases | 80 | 15 | 1 | 9 | 10 | 2 | 7 | 9 |
Calcium-dependent protein kinases | 62 | 11 | 2 | 7 | 9 | 1 | 8 | 9 |
CBL-interacting kinases | 59 | 6 | 0 | 3 | 3 | 1 | 3 | 4 |
Cyclin-dependent kinases | 40 | 6 | 0 | 6 | 6 | 0 | 3 | 3 |