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Table 3 Functional domains of PbHsfs

From: Genome-wide identification and comparative analysis of the heat shock transcription factor family in Chinese white pear (Pyrus bretschneideri) and five other Rosaceae species

Gene name

DBD

HR-A/B

NLS

NES

AHA

PbHsfA1a

16-109

126-196

(222) NKKRRLPR

(486) MNYITEQMQ

AHA(439) DIFWEQFLTAS

PbHsfA1b

16-109

126-196

(222) NKKRRLPR

(486) MNYITEQMQ

AHA(439) DIFWEQFLTAS

PbHsfA1c

39-132

153-220

(243) NKKRRLKQ

(499) MDNLTEKMG

AHA(452) DIEAFLKDWDD

PbHsfA2a

38-131

145-212

(227) KNR-X6-RKRR

(365) LVDQMGYL

AHA1(315) ETIWEELWSD

AHA2(355) DWGEDLQD

PbHsfA3a

99-216

237-296

(308) KT-X10-RRKFVK

nd

AHA1(472) EDIWSMGFGV

AHA2(491) ELWGNPVNY

AHA3(511) LDVWDIGPLQ

AHA4(527) IDKSPAHDS

AHA1(471) EDIWSMDFDI

PbHsfA3b

103-215

237-295

(311) KDRGSSRVRRKFVK

nd

AHA2(489) NELLGNPVNY

AHA3(510) LDVWDIDPLQ

AHA4(526) INKWPAHES

PbHsfA4a

11-94

113-190

(208) RKRRLPR

(407) LTEQMGHL

AHA1(252) LTFWEDTIHD

AHA2(356) DGFWEQFLTE

PbHsfA4b

11-94

113-188

(206) RKRRLPR

(410) LTEQMGHL

AHA1(250) LTFWEDTIHD

AHA2(359) DVFWEQFLTE

PbHsfA4c

12-106

137-186

(204) KKRR

(429) FTNQIGRL

AHA1(252) LNFWEDFVHGI

AHA2(378) DVFWEQCLTE

PbHsfA4d

12-106

137-187

(205) KKRR

(425) FRNQIGRP

AHA1(247) LNFWEDFLHGV

AHA2(372) DVFWEQCLTE

PbHsfA5a

12-105

116-183

(194) RK-X10-KKRR

(477) AETLTL

AHA (431) DVFWEQFLTE

PbHsfA6a

31-125

154-204

(229) KKRRR

(344) LIEELGFL

AHA(312) DKGFWQDLFNE

(271) EVSELNQFAM

PbHsfA6b

21-115

144-194

(210) RKELEKAVTKKRRR

(334) LIEELGFL

AHA(302) DKGYWQELFNE

PbHsfA6c

21-115

144-194

(210) RKELEKAVTKKRRR

(334) LIEELGFL

AHA(302) DKGYWQDLFNE

PbHsfA7a

44-138

167-217

(232) KKKELEEAMTKKRRR

(351) LADRLGYV

AHA(319) DEGFWEELFSE

PbHsfA7b

44-138

167-217

(232) KKKELEEAMTKKRRR

(344) LADRLGYF

AHA(312) DEGFWEELLSE

PbHsfA8a

18-111

129-198

(177) RNRLR

(389) TEQMGHL

AHA (308) DGAWEQFLLA

PbHsfA9a

95-182

247-315

(268) KR-X12-KRRR

(401) FYQELEDL

AHA(467) PCDWSAYVSHS

PbHsfA9b

139-239

241-308

(324) KR-X8-KRRR

(258) LKKDQD

AHA(460) PCDWSAYVSNS

PbHsfB1a

6-99

142-191

(246) KGDEKMKGKK

nd

nd

PbHsfB1b

66-99

42-191

(246) KGEEKMKGKK

(223) LDMEGG

nd

PbHsfB2a

42-135

174-217

(187) RLRK

nd

nd

PbHsfB3a

19-112

149-194

(223) RKRKR

(208) PKLFGVRLE

nd

PbHsfB3b

19-112

149-194

(223) RKRKR

(208) PKLFGVRLE

nd

PbHsfB3c

22-116

149-194

(180) KRKCK (223) RKRKR

(208) LKLFGVRLE

nd

PbHsfB4a

21-114

179-239

(326) KNTK-X9-KKR

(367) LEKDDLGLHLM

nd

PbHsfB5a

11-111

151-188

nd

(151) LRKQKLELQV

nd

PbHsfC1a

9-102

121-173

(197) KKRR

nd

nd

PbHsfC1b

9-102

126-178

(225) KKRR

nd

nd

  1. nd: no motifs detectable by sequence similarity search.