Table 3 Statistics of annotation result for unigenes from the five oil crops seed cDNA libraries
Species | No. of unigenes | Hit to A. thaliana (%) | Hit to Nr (%) | Hit to Swiss-Prot (%) | Hit to TrEMBL (%) | Annotated to GO (%) |
|---|---|---|---|---|---|---|
B. napus (LO) | 13899 | 7681(55.3%) | 5377(38.7%) | 3638(26.2%) | 5336(38.4%) | 1870(13.5%) |
B. napus (HO) | 21712 | 13076(60.2%) | 9925(45.7%) | 6733(31.0%) | 9293(42.8%) | 3358(15.5%) |
A. hypogaea | 15718 | 12618(80.3%) | 13561(86.3%) | 10714(68.2%) | 13479(85.8%) | 13114(83.4%) |
G. max | 27982 | 24439(87.3%) | 25090(89.7%) | 20745(74.1%) | 26880(96.1%) | 25403(90.8%) |
S. indicum | 27524 | 15236(55.4%) | 21193(77.0%) | 15797(57.4%) | 27173(98.7%) | 18475(67.1%) |
Total | 106835 | 73050 | 75146 | 57627 | 82161 | 62220 |