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Table 4 Summary information for significant DArT-seq markers in linkage disquilibrium (r2 > 0.8) with RphCantala on chromosome 5HL

From: Genetic mapping of a new race specific resistance allele effective to Puccinia hordei at the Rph9/Rph12locus on chromosome 5HL in barley

Locus name

DArT clone ID

Sequence

DART4872

100025017|F|0-28:G > C-28:G > C

TGCAGCAAAAATAGCACCGCCACACAACGTGCGCGGCAGCGCTCCCTCCAGCGACGCGACGCCTAGGAT

DART7508

100020485|F|0-40:G > A-40:G > A

TGCAGGGGGCAAGAGCAAACAAGGCATGATGAGCAAACCAGGCATGGTTGAGAGATCAGGCTAATTGTT

DART7846

100023795|F|0-13:G > A-13:G > A

TGCAGTACCTCGCGCTCTCCGGCAACGAGCTGTCTGGCAAGATACCGCCGAGATCGGAAGAGCGGTTCA

DART3080

100017949|F|0-37:A > G-37:A > G

TGCAGCTCGAAGAGACCCTTGGGAATGGAGCCGTTCAAGTAGTTCTCTCCGAGACGGATACGGCTCAAG

DART3263

100023711|F|0--33:C > A

TGCAGGCTCCCGCAGCCGCTGCTCCGTTCATCCCCCAGCAGCACCAGTACGTCACTCAGACGGGCACGG

DART5481

100009066|F|0--42:A > G

TGCAGCCAACCTTGGATGGAACACACAGAAAACCAGTATGCCAGTCCTCGATTTAAAGATGGGGCTAGA

DART2133

100025595|F|0--17:C > A

TGCAGTCCTGCTCATCTCTTCTTATGGTGACTACATGTTCTTCTTCATCTGGCTGGTCTGAGTTGGATG

DART2681

100009568|F|0--11:A > G

TGCAGTGGAATATAGCAAGGGCGGAGCAGCACAGTCAGTCAAGTCTGCATGCATGCGAGCAACCGTTGC

DART6198

100012213|F|0-56:T > C-56:T > C

TGCAGGTTTTTGAACTTTGAAGAACTCGCGCCGCTGCCTTGGGAAAATGTTTGAATTGTCCAAGGACAT

DART4228

100017110|F|0-68:A > G-68:A > G

TGCAGTTAGTCCAAGAAAGAGGAAAGCTGATGATGGTCTCAGTCTCAGTCCAAGAAAGAGGAAAGCTGA

DART4182

100011760|F|0-59:G > A-59:G > A

TGCAGATTTGTAGTCCACTAGGTACTAGTACTATCTTGTAGCGAGATTGCGAGGTTGCAGTCTCAGGGA

DART5422

100021856|F|0-28:C > A-28:C > A

TGCAGATGGAGACGAGGAGAAGCACGATCGATCCCAGGCCAAAAGGTCCAGCAAATGACATGCAAAGAG

DART462

100004133|F|0-16:C > T-16:C > T

TGCAGAGCTCCTCAACCGTGCCTATTTATCTGCACATGGAGCCTTCAGGGCTTCAGGAAAAATCGCATC

DART4851

100021552|F|0--65:T > C

TGCAGGCATGATCGGAAGTTTTCCCATGCCGCCTCATTCACATCCCAACCGAAATCAACAACAAATAAG

  1. DArT locus names used throughout manuscript derived from clone ID/SNP variant and associated sequence read.