Gene groups | Total | Good SNP loci | Polymorphic SNP loci | |||
---|---|---|---|---|---|---|
no. (%) | MAF = 0 (n) | 0 < MAF < 0.05 (n) | MAF ≥ 0.05 (n)* | SNP marker in total (%) | ||
HCGs | 162 | 118 (72.8%) | 19 | 3 | 96 | 61.1% |
DEGs | 118 | 87 (73.7%) | 20 | 3 | 64 (6) | 56.8% |
RGAs | 152 | 96 (63.2%) | 35 | 6 | 55 (6) | 40.1% |
Total | 432 | 301 (69.7%) | 74 | 12 | 215 (12) | 52.50% |