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Table 5 SSRs identified in assembled contigs of Musa acuminata

From: Transcriptome analysis of ripe and unripe fruit tissue of banana identifies major metabolic networks involved in fruit ripening process

Description

Contigs

Singletons

Total number of sequences examined

19410

92,823

Total size of examined sequences (bp)

12460249

13532481

Total number of identified SSRs

1106

1930

Number of SSR containing sequences

1004

1772

Number of sequences containing more than 1 SSR

94

141

Di-nucleotide repeats

454

834

Tri-nucleotide repeats

536

579

Tetra-nucleotide repeats

24

49

Penta-nucleotide repeats

5

5

Hexa-nucleotide repeats

8

8