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Table 1 Avicennia officinalis ESTs identified from salt gland-rich tissue after subtractive hybridization

From: Identification of salt gland-associated genes and characterization of a dehydrin from the salt secretor mangrove Avicennia officinalis

Avicennia clone ID and classification

Putative function

O f

Reference organism and accession no.

Avicennia officinalis EST GenBank accession no.

e -value

704864 Signal transduction

Mitochondrial Rho GTPase

1

Glycine max GLYMA10G29580.1

JZ721695

9.00E-71

719405 Signal transduction

Leucine-rich repeat protein kinase

1

Arabidopsis thaliana AT5G49760.1

JZ721696

4.00E-80

719420 Signal transduction

Serine/threonine-protein kinase

1

Glycine max GLYMA07G30791.1

JZ721697

3.00E-57

720115 Signal transduction

Casein kinase II, alpha chain, putative

1

Oryza sativa LOC_Os07g02350.1

JZ721679

4.00E-100

720108 Signal Transduction

Xylem cysteine peptidase 2

1

Arabidopsis thaliana AT1G20850.1

JZ721680

1.00E-26

708681 Signal transduction

Serine/arginine-rich protein splicing factor 34b

1

Arabidopsis thaliana AT4G02430.1

JZ721698

8.00E-50

721424 Metabolism/Amino acid

Trypsin family protein

1

Arabidopsis thaliana AT5G45030.1

JZ721699

1.00E-95

694067 Metabolism/Amino acid

Glutamate synthase

2

Oryza sativa LOC_Os01g48960.1

JZ721681

4.00E-107

708680 Metabolism/Amino acid

Arginine decarboxylase

1

Populus trichocarpa POPTR_0004s17020.1

JZ721700

3.00E-81

708683 Metabolism/Lipid

ATP-citrate lyase

1

Arabidopsis thaliana AT1G60810.1

JZ721701

0

694059 Metabolism/Lipid

Phospholipase D

1

Glycine max GLYMA07G03490.3

JZ721702

3.00E-160

719630 Metabolism/Lipid

3-ketoacyl-CoA synthase

4

Glycine max GLYMA04G20620.1

JZ721682

4.00E-48

719448 Metabolism/Protein

Protein translation factor SUI1 homolog

1

Oryza sativa LOC_Os07g34589.2

JZ721683

6.00E-83

714704 Metabolism/Protein

Syringolide-induced protein 19-1-5

1

Glycine max GLYMA17G07240.1

JZ721703

4.00E-15

720030 Metabolism/Protein

Ribosomal protein S6

1

Arabidopsis thaliana AT4G31700.1

JZ721710

1.00E-154

719373 Metabolism/Sugar

Trehalose 6-phosphatase synthase S6

1

Arabidopsis thaliana AT1G68020.1

JZ721704

1.00E-50

720067 Metabolism/Vitamin

1-aminocyclopropane-1-carboxylate oxidase

1

Populus trichocarpa POPTR_0002s21750.1

JZ721705

1.00E-151

719392 Metabolism/Energy

Cytochrome-c oxidase

1

Arabidopsis thaliana AT1G80230.1

JZ721688

1.00E-46

703868 Metabolism/Energy

Thioredoxin H

7

Avicennia marina BM497420.1

JZ721687

8.00E-143

703936 Stress response

Ubiquitin-conjugating enzyme 2

1

Arabidopsis thaliana AT2G02760.1

JZ721684

4.00E-52

719444 Stress response

26S protease regulatory subunit 4 homolog

1

Oryza sativa LOC_Os07g49150.1

JZ721685

2.00E-119

719392 Stress response

Dehydrin

9

Avicennia marina BM172730.1

JZ721686

9.00E-42

703860 Stress response

Peroxidase

1

Avicennia marina BM173160.1

JZ721712

1.00E-175

724765 Stress response

Disease resistance

1

Avicennia marina BM497281.1

JZ721711

1.00E-65

704843 Transcription factor

NAC domain containing protein 32

4

Arabidopsis thaliana AT1G77450.1

JZ721689

1.00E-24

709313 Transcription factor

Transcription factor R2R3 factor gene family

3

Arabidopsis thaliana AT3G12720.1

JZ721690

2.00E-13

719394 Transcription factor

Auxin signaling F-box 2

1

Arabidopsis thaliana AT3G26810.1

JZ721706

7.00E-45

720062 Transcription factor

Salt-inducible zinc finger 2

1

Arabidopsis thaliana AT2G40140.1

JZ721691

9.00E-41

713984 Transcription factor

Transcription factor HBP-1b

1

Oryza sativa LOC_Os01g59350.1

JZ721707

2.00E-22

714010 Transcription factor

AP2 domain-containing transcription factor

1

Populus trichocarpa POPTR_0016s08530.1

JZ721708

3.00E-73

694065 Transporter/ABC

White-brown-complex ABC transporter family

4

Arabidopsis thaliana AT1G51460.1

JZ721692

5.00E-23

720073 Transporter/Ion

Vacuolar ATP synthase subunit D

1

Arabidopsis thaliana AT3G58730.1

JZ721693

2.00E-108

709299 Transporter/Ion

Plasma membrane H + ATPase

1

Avicennia marina BM172881.1

JZ721694

6.00E-179

719615 Transporter/Water

Aquaporin

3

Oryza sativa LOC_Os04g47220.1

JZ721709

7.00E-119

  1. Functional annotation was done after blasting the sequences with various plant gene databases. Clone ID with classification (column 1) and the putative function (column 2) based on comparison with reference organisms are shown. Occurrence frequency (Of), which is the number of times a specific EST was identified in the SH is given in column 3. The reference organism to which the EST was compared with and its accession number are given in columns 4 and Avicennia officinalis EST GenBank accession numbers are given in column 5. The e-values of sequence comparison of the A. officinalis ESTs with the reference sequences are given in column 6.