| Illumina Miseq | PacBio RS II |
---|---|---|
Library size(bp) | 400 | 20,000 |
Number of raw reads | 12,164,066 | 226,904 |
High quality bases(M) | 394 | 845 |
Mean read length(bp) (raw-data) | 250 | 4,474 |
CP average read depth ( error-corrected) | 712× (n.a.) | 105× |
proportion of bases > = Q40 | 99.99% | 99.98% |
SC average read depth | 493× | 83× |
IR average read depth | 531× | 52× |
No. of gaps | 2 | 0 |
No. of contigs | 1 | 1 |
The total length (bp) | 163,747 | 163,600 |