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Table 4 List of associations detected on 90 accessions with locule number and fruit shape index

From: Genes involved in floral meristem in tomato exhibit drastically reduced genetic diversity and signature of selection

Phenotype SNP_ID Gene Chromosome SNP Position (bp) p-value
Locule number      
  solcap_snp_sl_23925   2 41345621 4.95 x10-4
  WUS_SNP_T_A_2117 WUS 2 41765967 1.28 x10-3
  LC_SNP_T_A_3774 LC 2 41765967 1.28 x10-3
  WUS_SNP_G_A_2168 WUS 2 41766018 1.07 x10-2
  WUS_SNP_T_C_3869 WUS 2 41767719 1.07 x10-2
  WUS_SNP_T_A_3979 WUS 2 41767829 4.95 x10-4
Fruit shape index      
  OVATE_SNP_A_G_269 OVATE 2 42944775 1.64 x10-2
  1. P-values according to the false discovery rate procedure (FDR).
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BMC Plant Biology

ISSN: 1471-2229

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