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Table 4 List of associations detected on 90 accessions with locule number and fruit shape index

From: Genes involved in floral meristem in tomato exhibit drastically reduced genetic diversity and signature of selection

Phenotype

SNP_ID

Gene

Chromosome

SNP Position (bp)

p-value

Locule number

     
 

solcap_snp_sl_23925

 

2

41345621

4.95 x10-4

 

WUS_SNP_T_A_2117

WUS

2

41765967

1.28 x10-3

 

LC_SNP_T_A_3774

LC

2

41765967

1.28 x10-3

 

WUS_SNP_G_A_2168

WUS

2

41766018

1.07 x10-2

 

WUS_SNP_T_C_3869

WUS

2

41767719

1.07 x10-2

 

WUS_SNP_T_A_3979

WUS

2

41767829

4.95 x10-4

Fruit shape index

     
 

OVATE_SNP_A_G_269

OVATE

2

42944775

1.64 x10-2

  1. P-values according to the false discovery rate procedure (FDR).
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BMC Plant Biology

ISSN: 1471-2229

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