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Table 2 Highly significantly differentially expressed genes between contrasting rootstocks under control conditions

From: Shoot chloride exclusion and salt tolerance in grapevine is associated with differential ion transporter expression in roots

Probe ID

12xV1 blast hit

12xV0 gene ID

Arabidopsis homolog

Log2 FC 140 R - K51-40

p-value

B

Functional annotation

NG11_47168_24630

VIT_09s0002g02430

GSVIVT01016879001

AT3G21250

-1.90

1.69E-42

89.62

ABC transporter C member 12

NG11_46088_11883

VIT_19s0015g01850

GSVIVT01014852001

AT1G55620

1.37

2.85E-34

70.44

CLCf (chloride channel F)

NG11_44542_25973

VIT_06s0004g03530

GSVIVT01025106001

AT3G45650

1.61

1.24E-32

66.55

Nitrate excretion transporter 2

NG2_21308_18913

VIT_11s0016g02570

GSVIVT01015240001

AT2G19690

3.01

1.05E-26

56.42

Phospholipase A2 precursor

NG2_12381_40127

VIT_06s0004g06340

GSVIVT01024768001

AT5G58800

3.35

5.46E-26

54.67

Flavodoxin-like quinone reductase 1

NG2_21123_37199

VIT_12s0028g02740

GSVIVT01020642001

-

-4.06

1.36E-24

51.28

Isoflavone methyltransferase/Orcinol O-methyltransferase 1 oomt1

NG11_25530_14040

VIT_04s0008g03580

GSVIVT01035643001

-

1.11

2.21E-24

47.44

Nitrate transporter 1.11

NG2_12165_35517

VIT_13s0073g00250

GSVIVT01034634001

AT2G26230

-5.07

9.34E-23

46.84

Urate oxidase

NG2_48691_28703

VIT_15s0046g01950

GSVIVT01026987001

-

2.97

4.01E-22

45.28

Anthocyanidine rhamnosyl-transferase

NG2_28672_23579

VIT_10s0003g03780

GSVIVT01021513001

AT1G30130

2.18

7.23E-22

44.65

Unknown protein

NG2_35994_23405

VIT_18s0001g13850

GSVIVT01009855001

AT4G31500

-3.20

1.93E-21

43.62

Cytochrome P450, family 83, subfamily B, polypeptide 1

NG2_48494_21157

VIT_18s0001g13820

GSVIVT01009854001

AT4G31500

-3.32

1.78E-19

38.90

Cytochrome P450, family 83, subfamily B, polypeptide 1

NG2_5431_23220

VIT_00s0153g00040

GSVIVT01001251001

-

-2.73

1.90E-19

38.83

S-locus receptor kinase

NG2_48249_3223

VIT_03s0038g01760

GSVIVT01024088001

-

3.48

2.76E-19

38.44

Disease resistance protein (CC-NBS class)

NG2_33320_2332

VIT_08s0007g01590

GSVIVT01034034001

-

-1.80

5.70E-19

37.65

Fructose 1,6-bisphosphatase

NG2_21199_29690

VIT_06s0004g00730

GSVIVT01025431001

AT3G13550

2.00

8.19E-19

37.26

Ubiquitin-conjugating enzyme E2 D/E

NG2_11819_5360

VIT_05s0094g00120

GSVIVT01038099001

AT3G59600

2.61

3.10E-18

35.84

DNA-directed RNA polymerase II subunit H

NG11_46422_21127

VIT_11s0016g05170

GSVIVT01015522001

AT2G26690

-1.22

2.58E-19

35.59

Nitrate transporter 1.4

NG2_12023_10427

VIT_18s0001g05430

GSVIVT01036371001

-

3.07

4.99E-18

35.33

(+)-delta-cadinene synthase isozyme XC14

NG2_45557_29139

VIT_10s0042g01130

GSVIVT01026257001

AT4G19670

3.69

7.83E-18

34.85

Zinc finger (C3HC4-type ring finger)

NG2_40716_2133

VIT_06s0061g00120

GSVIVT01031543001

-

3.17

7.99E-18

34.82

Beta-1,3-glucanase [Vitis riparia]

NG11_51750_10097

VIT_06s0004g03520

GSVIVT01025107001

AT3G45650

1.27

7.60E-19

34.49

Nitrate excretion transporter 1

NG2_45497_36221

VIT_12s0028g02810

GSVIVT01020636001

-

-1.58

2.64E-17

33.55

Isoflavone methyltransferase/Orcinol O-methyltransferase 1 oomt1

NG2_6989_23958

VIT_06s0004g05440

GSVIVT01024878001

AT2G29260

-1.23

3.46E-17

33.27

Tropinone reductase

NG2_5127_34182

VIT_03s0097g00620

GSVIVT01038529001

AT5G64440

1.71

4.59E-17

32.98

N-acylethanolamine amidohydrolase

NG2_7581_45053

VIT_06s0080g00800

GSVIVT01036089001

AT5G22360

2.01

7.43E-17

32.47

Vesicle-associated membrane protein 714

NG2_12628_32903

VIT_10s0071g00440

GSVIVT01034406001

AT4G11900

-3.24

7.90E-17

32.40

Serine/threonine-protein kinase receptor ARK3

NG2_48742_21119

VIT_08s0007g09030

GSVIVT01033230001

-

-1.40

2.03E-16

31.39

DnaJ homolog, subfamily A, member 5

NG2_575_20076

VIT_16s0098g01670

GSVIVT01038570001

AT5G53070

1.57

3.23E-16

30.90

Ribosomal protein L9

NG2_5167_10137

VIT_05s0029g00770

GSVIVT01020981001

-

-1.67

3.40E-16

30.84

Nematode resistance-like protein

NG2_12777_24696

VIT_18s0117g00080

GSVIVT01012796001

AT5G36930

3.34

3.95E-16

30.68

R protein L6

NG2_5559_11115

VIT_02s0025g00930

GSVIVT01019469001

AT3G59140

-1.63

5.03E-16

30.43

Multidrug resistance-associated protein 14

NG2_36555_51297

VIT_03s0088g00390

GSVIVT01037045001

AT5G23590

1.34

6.02E-16

30.24

DnaJ homolog, subfamily C, member 17

  1. Highly significantly differentially expressed unique genes (P <0.05, ≥ ±1.41 fold, B >30) between 140 Ruggeri and K51-40 root tissue under control conditions identified using the B-statistic. Positive log(2) FC values = higher in 140 Ruggeri.