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Table 1 Differentially expressed genes between contrasting rootstocks encoding putative solute transporters under control conditions

From: Shoot chloride exclusion and salt tolerance in grapevine is associated with differential ion transporter expression in roots

Probe ID

12xV1 blast hit

12xV0 gene ID

Arabidopsis homolog

Log(2) FC 140R - K51-40

p-value

Functional annotation

CUST_15333_17284

VIT_02s0012g01270

GSVIVT01013161001

AT4G17870

1.41

1.11E-09

Abscisic acid receptor PYL1 RCAR11

NG2_36172_20391

VIT_06s0080g00170

GSVIVT01036162001

AT1G08440

-0.69

3.02E-04

Aluminum activated malate transporter 1

CUST_44694_7793

VIT_06s0009g00450

GSVIVT01037570001

AT1G08440

0.78

1.90E-03

Aluminum activated malate transporter 1

CUST_46237_21897

VIT_08s0105g00250

GSVIVT01011148001

AT3G11680

1.30

2.51E-04

Aluminum activated malate transporter 1

CUST_8680_62299

VIT_11s0052g00320

GSVIVT01029283001

AT4G29900

-0.70

3.31E-04

Calcium ATPase 10 (ACA10), plasma membrane

NG2_12175_47390

VIT_07s0129g00180

GSVIVT01000123001

AT4G37640

0.58

8.86E-03

Calcium ATPase 2 (ACA2), plasma membrane

CUST_16133_33172

VIT_07s0129g00110

GSVIVT01000116001

AT4G37640

0.66

1.65E-02

Calcium ATPase 2 (ACA2), plasma membrane

NG2_35892_10569

VIT_06s0004g06570

GSVIVT01024741001

AT3G51860

1.44

5.00E-12

Calcium/proton exchanger CAX3

CUST_50946_56104

VIT_02s0025g04520

GSVIVT01019868001

AT1G12580

0.70

2.43E-05

Calcium-dependent protein kinase 1 CPK protein kinase

CUST_17465_49753

VIT_08s0032g00780

GSVIVT01022524001

AT2G38910

0.52

2.67E-02

Calcium-dependent protein kinase 20 CPK20

CUST_25785_57840

VIT_18s0001g00980

GSVIVT01008747001

-

-0.61

7.21E-03

Calcium-dependent protein kinase 9 CPK9

CUST_45042_37341

VIT_15s0021g01150

GSVIVT01018316001

AT1G28710

-1.59

4.74E-07

Calcium-dependent protein kinase-related

CUST_46046_19308

VIT_01s0010g02150

GSVIVT01010291001

AT1G14590

1.08

3.25E-07

Calcium-dependent protein kinase-related

CUST_25533_22696

VIT_05s0020g04240

GSVIVT01018059001

AT5G57110

0.76

7.26E-04

Calcium ATPase 12 (ACA12)

CUST_38995_37629

VIT_14s0030g02090

GSVIVT01021803001

AT3G63380

1.41

2.60E-05

Calcium ATPase 12 (ACA12)

CUST_40093_46251

VIT_05s0020g04260

GSVIVT01018061001

AT3G22910

-0.63

9.81E-03

Calcium ATPase 13 (ACA13)

NG2_7370_1539

VIT_09s0018g01840

GSVIVT01016118001

AT3G13320

0.99

1.10E-05

Cation exchanger (CAX2)

CUST_43832_58554

VIT_08s0056g01480

GSVIVT01029961001

AT5G17860

0.97

4.47E-03

Cation exchanger (CAX7)

NG11_49713_18843

VIT_14s0068g02190

GSVIVT01033108001

AT3G27170

-0.61

7.55E-05

Chloride channel B (CLC-b)

NG11_46088_11883

VIT_19s0015g01850

GSVIVT01014852001

AT1G55620

1.37

2.85E-34

Chloride channel F (CLC-f)

NG11_51750_10097

VIT_06s0004g03520

GSVIVT01025107001

AT3G45650

1.27

7.60E-19

Nitrate excretion transporter 1

NG11_44542_25973

VIT_06s0004g03530

GSVIVT01025106001

AT3G45650

1.61

1.24E-32

Nitrate excretion transporter 2

NG11_46422_21127

VIT_11s0016g05170

GSVIVT01015522001

AT2G26690

-1.22

2.58E-19

Nitrate transporter 1.4

CUST_37073_22417

VIT_01s0127g00070

GSVIVT01013802001

AT1G12940

0.63

6.29E-03

Nitrate transporter 2.5

CUST_42271_1540

VIT_14s0066g00850

GSVIVT01032430001

AT5G14570

1.59

8.82E-06

Nitrate transporter 2.7

NG2_12101_30038

VIT_03s0097g00510

GSVIVT01038513001

AT5G64410

0.87

1.65E-06

Oligopeptide transporter OPT4

NG12_21396_16431

VIT_12s0035g01820

GSVIVT01023146001

AT1G59740

0.52

2.47E-05

Proton-dependent oligopeptide transport (POT) family protein

NG11_4749_12704

VIT_17s0000g05550

GSVIVT01008072001

AT3G47960

0.54

1.88E-04

Glucosinolate transporter 1 (GTR1)

NG11_7897_10153

VIT_14s0066g02020

GSVIVT01032550001

AT5G14940

0.64

3.31E-07

Proton-dependent oligopeptide transport (POT) family protein

NG11_35177_1429

VIT_18s0041g00670

GSVIVT01026058001

AT1G72140

0.89

7.91E-14

Proton-dependent oligopeptide transport (POT) family protein

NG11_25530_14040

VIT_04s0008g03580

GSVIVT01035643001

AT1G22550

1.11

2.21E-24

Nitrate transporter 1.11

NG11_31776_20297

VIT_16s0050g01860

GSVIVT01028789001

AT5G24030

0.54

4.61E-05

SLAH3 (SLAC1 Homologue 3)

CUST_21950_56777

VIT_07s0191g00070

GSVIVT01003419001

AT4G40010

-1.01

1.28E-04

SNF1-related protein kinase 2.7 (SnRK2.7)

CUST_41758_42394

VIT_00s0710g00020

GSVIVT01002389001

AT4G33950

-0.56

1.54E-02

SNF1-related protein kinase 2.6 (SnRK2.6)

CUST_27252_1533

VIT_01s0011g06550

GSVIVT01011573001

AT2G01980

-2.30

1.53E-05

SOS1 (Na+/H + antiporter)

CUST_15165_41173

VIT_06s0004g07830

GSVIVT01024587001

AT5G58380

-0.73

1.72E-06

SOS2 (salt overly sensitive 2)

CUST_27642_7432

VIT_16s0098g01870

GSVIVT01038549001

AT5G24270

-0.67

8.65E-03

SOS3 (salt overly sensitive 3)

  1. List of significantly differentially expressed genes (P <0.05, ≥ ±1.41 fold) between the contrasting grapevine rootstocks 140 Ruggeri and K51-40 in the absence of Cl− treatment that have putative roles in ion homeostasis. Positive log(2) FC values = higher in 140 Ruggeri.