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Table 1 List of annotated MYB genes with two or more repeats in the B. vulgaris ssp. vulgaris (KWS2320) genome

From: Genome-wide identification and characterisation of R2R3-MYB genes in sugar beet (Beta vulgaris)

Gene ID Gene code Chr. Position on pseudochr. Clade (subgroup) Landmark MYB in clade Functional assignment Protein length [aa] Exon nr.
iquc Bv1g001230_iquc 1 1,379,505 1,381,156 C14 (S4) AtMYB4, HvMYB5 Metabolism 341 3
owzx Bv1g001750_owzx 1 1,903,239 1,898,047 C8 (S3) AtMYB58, AtMYB63 Metabolism 316 3
dwki Bv1g002800_dwki 1 3,065,434 3,067,536 C18 (S5) VvMYBPA Metabolism 335 2
qxpi Bv1g006050_qxpi 1 6,597,147 6,601,421 C3 AtLMI2 Development 303 3
ksfi Bv1g014750_ksfi 1 32,690,615 32,692,641 C12 (S14) SlBLIND, AtRAX1 Development 363 3
zqor Bv1ug018140_zqor 1un 38,330,908 38,328,715 C28 (S18) HvGAMYB, AtDUO1 Development 303 3
jxgt Bv1ug021520_jxgt 1un 45,201,741 45,199,866 C36 (S21) AtLOF1, AtMYB52 Devel., metab. 350 2
uksi Bv2g023560_uksi 2 127,507 126,341 C35 (S23)    253 1
wdyc Bv2g024650_wdyc 2 1,373,912 1,378,227 C35 (S23)    416 2
ihfg Bv2g027580_ihfg 2 4,418,041 4,424,427 C15 FaMYB1 Metabolism 199 3
jkkr Bv2g027795_jkkr 2 4,723,639 4,720,911 C21   (metabolism) 224 3
mxck Bv2g027990_mxck 2 4,981,898 4,984,692 C29    286 4
xprd Bv2g029260_xprd 2 6,275,539 6,272,224 C27 EgMYB2, PtMYB4 Metabolism 422 2
ralf Bv2g030925_ralf 2 8,431,718 8,435,595 C21   (metabolism) 237 3
ghua Bv2g031800_ghua 2 9,813,407 9,800,544 C37 (MYB3R) AtMYB3R1 Cell cycle 1050 11
huqy Bv2g039110_huqy 2 27,806,443 27,798,295 C26 AtMYB26 Development 329 2
dcmm Bv2g040720_dcmm 2 33,641,162 33,643,072 C1 (S9) AmMIXTA, AtNOK differentiation 454 3
mxwz Bv2g041120_mxwz 2 34,717,448 34,719,429 C11 AtTDF1 Development 331 3
nqis Bv2ug047120_nqis 2un 45,488,410 45,491,366 C4 (S1) AtMYB30 Defense 344 3
urrg Bv3g049510_urrg 3 1,126,350 1,124,818 C9 (S2) NtMYB1, AtMYB13 Defense 288 3
hwcc Bv3g050090_hwcc 3 1,847,195 1,845,526 C6 (S24)    360 3
cwtt Bv3ug070140_cwtt 3un 35,695,445 35,697,294 C29    242 3
cjuq Bv4g071740_cjuq 4 221,407 222,747 C19 VvMYB5a Metabolism 306 2
yruo Bv4g073190_yruo 4 1,667,414 1,671,378 C27 EgMYB2, PtMYB4 Metabolism 397 2
ygxg Bv4g074860_ygxg 4 3,396,314 3,392,041 C28 (S18) HvGAMYB, AtDUO1 Development 556 3
skuh Bv4g078900_skuh 4 7,533,943 7,547,807 C42 (MYB4R) AtMYB4R1   919 12
zfig Bv4g079610_zfig 4 8,546,454 8,544,269 C25 (S13) AtMYB61 Metabolism 449 3
oref Bv4g079670_oref 4 8,669,284 8,678,138 C41 (CDC5) AtCDC5 Cell cycle 991 4
josh Bv4g083815_josh 4 16,552,338 16,566,035     209 3
rwwj Bv4g084340_rwwj 4 18,292,096 18,285,979 C14 (S4) AtMYB4, HvMYB5 Metabolism 322 3
xwne Bv4g091510_xwne 4 32,888,798 32,889,966 C11 AtTDF1 Development 316 3
jofq Bv5g098940_jofq 5 834,523 837,220 C10    294 2
sskd Bv5g100530_sskd 5 2,767,018 2,770,045 C23 AtMYB103 Development 378 3
mhxh Bv5g101320_mhxh 5 3,800,529 3,804,868 C37 (MYB3R) AtMYB3R1 Cell cycle 525 7
zkef Bv5g107260_zkef 5 14,451,259 14,465,332     272 2
ztyd Bv5g110930_ztyd 5 25,553,310 25,538,334 C32 (S19) AtMYB21 Development 231 3
udmh Bv5g110960_udmh 5 25,780,619 25,782,807 C4 (S1) AtMYB30 Defense 293 3
tcwd Bv5g112510_tcwd 5 31,754,754 31,740,788 C37 (MYB3R) AtMYB3R1 Cell cycle 549 7
nmrg Bv5g115970_nmrg 5 42,841,475 42,839,260 C4 (S1) AtMYB30 Defense 334 3
oaxt Bv5g116880_oaxt 5 44,348,080 44,350,042 C11 AtTDF1 Development 356 3
tfkh Bv5g118200_tfkh 5 46,474,363 46,471,416 C38 (S25) AtPGA37 Development 501 3
ahtj Bv5g118320_ahtj 5 46,667,594 46,670,167 C38 (S25) AtPGA37 Development 456 3
cfqe Bv5g118940_cfqe 5 47,478,672 47,484,506     354 3
roao Bv5g122000_roao 5 50,845,046 50,849,238 C9 (S2) NtMYB1, AtMYB13 Defense 304 3
iogq Bv5g122370_iogq 5 51,297,529 51,287,534 C13 (S7) ZmP, AtPFG1 Metabolism 387 3
ijmc Bv5g123335_ijmc 5 52,180,596 52,182,338 C33 (S20) TaPIMP1, AtBOS1 Def., devel. 313 3
ohkk Bv5ug126300_ohkk 5un 58,923,676 58,920,132 C39 AmPHAN, AtAS1 Development 369 1
knac Bv5ug126380_knac 5un 59,366,406 59,371,048 C36 (S21) AtLOF1, AtMYB52 Devel., metab. 354 3
qcwx Bv5ug126530_qcwx 5un 60,109,952 60,111,819 C7 (S11) AtMYB102 Defense 334 2
such Bv6g128620_such 6 508,583 510,104 C34 (S22) AtMYB44 Def., devel. 313 1
hwmt Bv6g129790_hwmt 6 2,064,496 2,062,852 C12 (S14) SlBLIND, AtRAX1 Development 321 3
oypc Bv6g136060_oypc 6 9,418,772 9,413,559 C6 (S24)    326 3
usyi Bv6g142590_usyi 6 24,870,820 24,874,245 C33 (S20) TaPIMP1, AtBOS1 Def., devel. 275 3
qttn Bv6g154730_qttn 6 58,819,129 58,822,997 C36 (S21) AtLOF1, AtMYB52 Devel., metab. 461 3
zeqy Bv6g155340_zeqy 6 59,766,073 59,770,527 C40 AtFLP Differentiation 445 12
yejr Bv7g162730_yejr 7 7,720,067 7,722,320 C12 (S14) SlBLIND, AtRAX1 Development 380 3
ahzs Bv7g172570_ahzs 7 37,491,045 37,494,304 C26 AtMYB26 Development 405 3
eztu Bv7g172590_eztu 7 37,594,009 37,596,132 C26 AtMYB26 Development 417 3
qzms Bv7g174540_qzms 7 40,066,216 40,070,163 C38 (S25) AtPGA37 Development 481 3
ksge Bv7g176420_ksge 7 42,070,277 42,071,595 C30 AtMYB59 Development 249 3
qzfy Bv7ug180860_qzfy 7un 49,349,681 49,351,461 C31    264 3
dxny Bv8g183050_dxny 8 719,286 716,855 C7 (S11) AtMYB102 Defense 409 3
zguf Bv8g183060_zguf 8 734,446 721,513 C7 (S11) AtMYB102 Defense 396 3
jona Bv8g199535_jona 8 37,703,170 37,704,769 C12 (S14) SlBLIND, AtRAX1 Development 271 3
khqq Bv8g200250_khqq 8 38,542,747 38,540,562 C12 (S14) SlBLIND, AtRAX1 Development 368 3
gjwr Bv9g216350_gjwr 9 33,882,588 33,884,593 C14 (S4) AtMYB4, HvMYB5 Metabolism 276 2
krez Bv9g225930_krez 9 44,634,979 44,633,906 C34 (S22) AtMYB44 Def., devel. 253 1
ezhe Bvg229250_ezhe rnd0020 411,935 416,451 C28 (S18) HvGAMYB, AtDUO1 Development 410 3
crae Bvg229400_crae rnd0039 39,535 40,725 C17 (S5) AtTT2 Metabolism 282 3
entg Bvg229850_entg rnd0043 141,170 143,052 C33 (S20) TaPIMP1, AtBOS1 Def., devel. 310 3
swwi Bvg235150_swwi rnd0157 176,581 179,181     191 3
oyjz Bvg238960_oyjz rnd0254 47,161 49,928 C3 AtLMI2 Development 239 3
dani Bvg239075_dani rnd0254 156,586 162,101 C24 (S16) AtLAF1 Development 285 3
sjwa Bvg239080_sjwa rnd0254 178,734 182,264 C24 (S16) AtLAF1 Development 278 3
pgya Bvg243050_pgya rnd0446 12,407 14,214     326 3
  1. The genes are ordered by RefBeet pseudochromosomes, from north to south. The unique, immutable four-letter identifier (gene ID) is given in the first column. The modifiable, annotation-version-specific gene code describing the chromosomal assignment and position on pseudochromosomes is given in the second column. "un" indicates the assignment to a chromosome without position and "rnd" indicates scaffolds without chromosomal assignment. Clade classification and functional assignment is based on the NJ tree presented in Figure 3.