Table 2 Predicted genes in the mapped qRgls2 interval and syntenic genes in maize and rice
Fine-mappedqRgls2on maize Chr. 5 | Syntenic gene on Maize Chr. 4 | Rice | ||
|---|---|---|---|---|
Gene ID | Predicted function | Syntenic gene | Predicted function | |
GRMZM2G030013 | KH domain-containing protein participates in RNA binding in post-transcription | NA | Os02t0125500 | KH domain-containing protein |
GRMZM2G477236 | lil3 protein, a light harvesting-like protein, plays an essential role in chlorophyll and tocopherol biosynthesis | GRMZM2G027640 | Os02t0125700 | lil3 protein |
GRMZM2G175137 | RNA polymerase II transcription factor B subunit 4 | GRMZM2G027209 | NA | NA |
GRMZM2G099827 | Microtubule-associated protein with anther-specific expression | GRMZM2G027187 | NA | NA |
GRMZM5G868966 | Unknown | GRMZM5G820374 | NA | NA |
GRMZM2G157068 | Protein kinase | GRMZM2G053868 | Os02t0126400 | Protein kinase |
GRMZM2G456088 | Pentatricopeptide repeat (PPR) superfamily protein, participates in post-transcriptional processes in plastids | AC216235.2_FGT010 | Os02t0126500 | PPR domain-containing protein |
GRMZM2G157046 | Leaf-expressed protein with unknown function | GRMZM2G053830 | Os02t0126600 | Unknown |
GRMZM2G157026 | Golgi SNARE 12 protein | GRMZM5G838961 | Os02t0126800 | Golgi SNAP receptor complex member |
GRMZM2G156983 | Phosphatidate cytidylyltransferase | GRMZM2G053711 | NA | NA |
AC189771.3_FG001 | Anther-specific expression with unknown function | NA | NA | NA |
GRMZM2G009065 | Inflorescence-expressed gene with unknown function | NA | NA | NA |
GRMZM2G039254 | PPR superfamily protein | NA | Os02t0127600 | PPR domain-containing protein |
GRMZM2G038791 | Ribose-phosphate pyrophosphokinase | NA | Os02t0127700 | Ribose-phosphate pyrophosphokinase |
GRMZM2G153178 | Unknown | NA | Os02t0128100 | Unknown |