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Table 2 Putative novel miRNAs in the two libraries

From: Identification and characterization of microRNAs related to salt stress in broccoli, using high-throughput sequencing and bioinformatics analysis

Novel ID

Location

Strand (+/−)

Energy (kcal/m

Sequence of 5P

Sequence of 3P

Bro-m001

A01:146563:146640

+

−20

-

AAAGTGGCTGTAGTTTAGTGG TG

Bro-m002

A01:13726926:13727021

+

−40.1

TACACTAGTTGTGGACATGGAC

-

Bro-m003

A02:16145164:16145426

+

−54.6

TCAAAGAATTAGTAGATCGGT

-

Bro-m004

A02:16493715:16493784

+

−24.9

-

TCGGACGTTTGTGACGGATTT CC

Bro-m005

A02:21365800:21365890

+

−22.9

-

GTGGACACTCTATCTGAGGCT TA

Bro-m006

A02:2629827:2629950

-

−45.3

GGAGGCAGCGGTTCATCGATC

-

Bro-m007

A02:22803188:22803422

-

−39

-

AGGGATATAGTGTATGGAGTG CA

Bro-m008

A02:25162550:25162723

-

−32.04

-

AAGTGGAGTAGAGTATAATGC AG

Bro-m009

A02:25162550:25162724

+

−47

AAAGATCTGAACCGAACACGAA

-

Bro-m010

A02:25162550:25162725

+

−22.1

TAATCATGTTTAGACTTAGATC

-

Bro-m011

A02:25162550:25162726

-

−21.6

ACGGTACGGTTTTAACAGTTAT

-

Bro-m012

A02:25162550:25162727

-

−18.5

AGAGACGATTCTTAACTTTTCTT

-

Bro-m013

A02:25162550:25162728

-

−51.7

GATCGAGATCCTTTGGAGTTAGTCC

GCTTGCTAGATGGATCTTGGA CA

Bro-m014

A02:25162550:25162729

-

−21.9

-

TGCGGGGTACAAAGACGTTTG

Bro-m015

A02:25162550:25162730

+

−24.7

TCTGTCAAGTGGAATGTGGCTT

-

Bro-m016

A02:25162550:25162731

+

−47.3

GTTCGGACGCGGCGTCAGACAC

-

Bro-m017

A02:25162550:25162732

-

−18.1

TTATTTACTTTTGTTAGACTCCA

-

Bro-m018

A02:25162550:25162733

-

−32.4

TTGACCAGACGACTTATATTTT

-

Bro-m019

A02:25162550:25162734

-

−51.7

CGGTCTGTGATGGTACTAGTA

-

Bro-m020

A02:25162550:25162735

-

−34.7

TTTTGGAGTAATGAGTTGGTTTA

-

Bro-m021

A02:25162550:25162736

+

−104.8

-

TGGATTGGAACCACATAGGCC

Bro-m022

A02:25162550:25162737

+

−36.6

TGGACGACTTAGTAGATGACTT

-

Bro-m023

A02:25162550:25162738

+

−38

AATCGATATGGACTAATATGGT

-

Bro-m024

A02:25162550:25162739

-

−61.7

TTTGCGGTTGCGGACGGTTA

-

Bro-m025

A02:25162550:25162740

-

−56.1

TAGCCAAGGATGACTTGCCTG

-

Bro-m026

A02:25162550:25162741

-

−75.9

TCTGACTGCTTAGATGATTGCTT

-

Bro-m027

A02:25162550:25162742

-

−33.9

-

AGAGACGTCTCTTAGCTTTTT TA

Bro-m028

A02:25162550:25162743

-

−62.3

-

AGAAGAAACGTAGAAAACAC TT

Bro-m029

A02:25162550:25162744

+

−50.5

CGACAGAAGAGAGTGAGCAC

-

Bro-m030

A02:25162550:25162745

+

−84.1

ATATACTCTCAAGCATATCAA

-

Bro-m031

A02:25162550:25162746

-

−71.8

-

TTCCCACAAGAACGAAAACTC

Bro-m032

A02:25162550:25162747

+

−28.4

AATGGACAAATGGATATGGGCT G

-

Bro-m033

A02:25162550:25162748

+

−46.3

TGACAGAAAGAGAGGTGAGCA CG

-

Bro-m034

A02:25162550:25162749

+

−18.5

-

TTATTTTTTGTAGCTATTTTTT

Bro-m035

A02:25162550:25162750

+

−54.2

TAGCCAAGGATGACTTGCCTG

-

Bro-m036

A02:25162550:25162753

-

−78.8

-

TAAGGACCCAAGAGCAAGGA C

Bro-m037

A02:25162550:25162754

+

−28.3

CAAGAGATCTGCAGCATGGCGC A

-

Bro-m038

A02:25162550:25162755

+

−71.1

TCTTGTTTGATTGGTGCATGTCA

-

Bro-m039

A02:25162550:25162756

-

−105.6

CAAGCGCTCTTCTCACAGCTT

-

Bro-m040

A02:25162550:25162757

-

−46

-

ACGAACCATAGTCCGTCGGTA

Bro-m041

A02:25162550:25162758

+

−59.2

-

TTATTTTTTGTAGCTATTTTTT A

Bro-m042

A02:25162550:25162760

-

−22.17

AAAGGAAAGTTAGAAGACTTCT

-

Bro-m043

A02:25162550:25162761

-

−50.2

-

TAAGAAACTTGCAATGGAGGA CA