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Table 1 Summary of DNA variations in the 29 sesame strains

From: Deep resequencing reveals allelic variation in Sesamum indicum

No.

Strain name

Total bases (Gb)

Total SNPs (number)

Total SNPs in gene (%)

Total InDels (number)

Total InDels in gene (%)

1_CHN

Zhongzhi No.15

4.21

73,716

28.5

11,441

28.6

2_CHN

Zhongzhi No.11

4.22

52,471

17.1

4,495

27.9

3_CHN

H98

4.05

123,830

22.8

17,998

27.4

4_CHN

Jizhi No.1

4.18

107,656

21.4

9,931

24.9

5_CHN

Jinzhi No.2

4.09

92,668

20.2

5,966

25.6

6_CHN

Zhima8131

3.81

109,905

37.1

25,752

33.9

7_CHN

2009-3335_2

4.06

208,773

27.8

37,602

28.3

8_CHN

ZZM2541

4.12

62,528

25.3

8,128

32.4

9_CHN

Yiyangbai

4.22

68,640

24.2

11,851

23.5

10_CHN

Zihuaye 23

4.20

46,507

17.8

7,289

24.3

11_CHN

Baizhima

4.21

176,649

25.4

32,028

26.9

12_CHN

Zhima

4.17

68,617

20.7

11,531

25.5

13_CHN

Mishuozhima

4.17

89,048

21.1

14,073

25.1

14_CHN

Bahuama

4.21

160,011

32.3

32,041

28.9

15_CHN

Xiangheizhi 2078

4.17

92,303

19.1

8,676

21.8

16_CHN

Fuyangsilengcao

4.07

79,310

16.8

9,436

26.5

17_AFG

0725

4.10

136,555

29.2

21,952

34.7

18_EGY

L161

4.15

203,642

27.6

26,351

28.9

19_GUI

K1

4.12

137,736

20.0

12,656

26.4

20_IND

0847

4.15

392,544

30.9

56,594

30.0

21_KOR

Shuiyuan 117

4.19

63,828

17.4

8,815

22.4

22_MOZ

Suke No5- < 2>

4.14

60,018

13.7

7,168

25.3

23_MOZ

Jasbrouk

4.16

61,093

19.1

8,929

27.0

24_MYA

Miandianhei

4.19

253,189

23.0

44,538

27.5

25_PHI

CLSU-1

4.08

200,737

22.3

16,553

27.9

26_UAE

24-1

4.12

260,055

23.1

31,722

27.2

27_USA

u.C.R/82NOINS

4.16

54,410

21.3

5,364

27.9

28_USA

Youxianxing N03

4.18

215,692

31.9

26,637

32.7

29_VIE

V6

4.17

40,925

15.8

5,363

20.3