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Table 1 Summary of DNA variations in the 29 sesame strains

From: Deep resequencing reveals allelic variation in Sesamum indicum

No. Strain name Total bases (Gb) Total SNPs (number) Total SNPs in gene (%) Total InDels (number) Total InDels in gene (%)
1_CHN Zhongzhi No.15 4.21 73,716 28.5 11,441 28.6
2_CHN Zhongzhi No.11 4.22 52,471 17.1 4,495 27.9
3_CHN H98 4.05 123,830 22.8 17,998 27.4
4_CHN Jizhi No.1 4.18 107,656 21.4 9,931 24.9
5_CHN Jinzhi No.2 4.09 92,668 20.2 5,966 25.6
6_CHN Zhima8131 3.81 109,905 37.1 25,752 33.9
7_CHN 2009-3335_2 4.06 208,773 27.8 37,602 28.3
8_CHN ZZM2541 4.12 62,528 25.3 8,128 32.4
9_CHN Yiyangbai 4.22 68,640 24.2 11,851 23.5
10_CHN Zihuaye 23 4.20 46,507 17.8 7,289 24.3
11_CHN Baizhima 4.21 176,649 25.4 32,028 26.9
12_CHN Zhima 4.17 68,617 20.7 11,531 25.5
13_CHN Mishuozhima 4.17 89,048 21.1 14,073 25.1
14_CHN Bahuama 4.21 160,011 32.3 32,041 28.9
15_CHN Xiangheizhi 2078 4.17 92,303 19.1 8,676 21.8
16_CHN Fuyangsilengcao 4.07 79,310 16.8 9,436 26.5
17_AFG 0725 4.10 136,555 29.2 21,952 34.7
18_EGY L161 4.15 203,642 27.6 26,351 28.9
19_GUI K1 4.12 137,736 20.0 12,656 26.4
20_IND 0847 4.15 392,544 30.9 56,594 30.0
21_KOR Shuiyuan 117 4.19 63,828 17.4 8,815 22.4
22_MOZ Suke No5- < 2> 4.14 60,018 13.7 7,168 25.3
23_MOZ Jasbrouk 4.16 61,093 19.1 8,929 27.0
24_MYA Miandianhei 4.19 253,189 23.0 44,538 27.5
25_PHI CLSU-1 4.08 200,737 22.3 16,553 27.9
26_UAE 24-1 4.12 260,055 23.1 31,722 27.2
27_USA u.C.R/82NOINS 4.16 54,410 21.3 5,364 27.9
28_USA Youxianxing N03 4.18 215,692 31.9 26,637 32.7
29_VIE V6 4.17 40,925 15.8 5,363 20.3