From: Deep resequencing reveals allelic variation in Sesamum indicum
No. | Strain name | Total bases (Gb) | Total SNPs (number) | Total SNPs in gene (%) | Total InDels (number) | Total InDels in gene (%) |
---|---|---|---|---|---|---|
1_CHN | Zhongzhi No.15 | 4.21 | 73,716 | 28.5 | 11,441 | 28.6 |
2_CHN | Zhongzhi No.11 | 4.22 | 52,471 | 17.1 | 4,495 | 27.9 |
3_CHN | H98 | 4.05 | 123,830 | 22.8 | 17,998 | 27.4 |
4_CHN | Jizhi No.1 | 4.18 | 107,656 | 21.4 | 9,931 | 24.9 |
5_CHN | Jinzhi No.2 | 4.09 | 92,668 | 20.2 | 5,966 | 25.6 |
6_CHN | Zhima8131 | 3.81 | 109,905 | 37.1 | 25,752 | 33.9 |
7_CHN | 2009-3335_2 | 4.06 | 208,773 | 27.8 | 37,602 | 28.3 |
8_CHN | ZZM2541 | 4.12 | 62,528 | 25.3 | 8,128 | 32.4 |
9_CHN | Yiyangbai | 4.22 | 68,640 | 24.2 | 11,851 | 23.5 |
10_CHN | Zihuaye 23 | 4.20 | 46,507 | 17.8 | 7,289 | 24.3 |
11_CHN | Baizhima | 4.21 | 176,649 | 25.4 | 32,028 | 26.9 |
12_CHN | Zhima | 4.17 | 68,617 | 20.7 | 11,531 | 25.5 |
13_CHN | Mishuozhima | 4.17 | 89,048 | 21.1 | 14,073 | 25.1 |
14_CHN | Bahuama | 4.21 | 160,011 | 32.3 | 32,041 | 28.9 |
15_CHN | Xiangheizhi 2078 | 4.17 | 92,303 | 19.1 | 8,676 | 21.8 |
16_CHN | Fuyangsilengcao | 4.07 | 79,310 | 16.8 | 9,436 | 26.5 |
17_AFG | 0725 | 4.10 | 136,555 | 29.2 | 21,952 | 34.7 |
18_EGY | L161 | 4.15 | 203,642 | 27.6 | 26,351 | 28.9 |
19_GUI | K1 | 4.12 | 137,736 | 20.0 | 12,656 | 26.4 |
20_IND | 0847 | 4.15 | 392,544 | 30.9 | 56,594 | 30.0 |
21_KOR | Shuiyuan 117 | 4.19 | 63,828 | 17.4 | 8,815 | 22.4 |
22_MOZ | Suke No5- < 2> | 4.14 | 60,018 | 13.7 | 7,168 | 25.3 |
23_MOZ | Jasbrouk | 4.16 | 61,093 | 19.1 | 8,929 | 27.0 |
24_MYA | Miandianhei | 4.19 | 253,189 | 23.0 | 44,538 | 27.5 |
25_PHI | CLSU-1 | 4.08 | 200,737 | 22.3 | 16,553 | 27.9 |
26_UAE | 24-1 | 4.12 | 260,055 | 23.1 | 31,722 | 27.2 |
27_USA | u.C.R/82NOINS | 4.16 | 54,410 | 21.3 | 5,364 | 27.9 |
28_USA | Youxianxing N03 | 4.18 | 215,692 | 31.9 | 26,637 | 32.7 |
29_VIE | V6 | 4.17 | 40,925 | 15.8 | 5,363 | 20.3 |