Haplotype diversity of VvTFL1A gene and association with cluster traits ingrapevine (V. vinifera)

BMC Plant Biology

Table 4 MLMM results

Trait	Forward step	mBonf <0.05	EBIC	Markers in the model	Gene region	Haplogroup	R2 Markers	R2 Model
Flowering time	1	8.98E-03	609	Ins883	Intron3	HGA	0.11	0.19
Flowering time	2	2.61E-01	603	+ W1087	Exon4		0.16	0.25
Cluster width	1	5.38E-04	492	Ins883	Intron3	HGA	0.13	0.34
Berry weight	1	1.26E-06	431	M-196	Promoter		0.21	0.76
Berry weight	2	1.49E-01	412	+ Ins883	Intron3	HGA	0.25	0.80

The models presented corresponded to the optimal models, i.e., optimizingEBIC and mBonf criteria. R2 Markers = variance explained bypolymorphisms in each model, R2 Model = cumulative varianceexplained by markers and genetic variance (structure and kinship).

ISSN: 1471-2229