Figure 1

Results of transcriptome and microRNAome profiling and their variations across the normal condition (NC) and the three chilling stress treatments – chilling shock (CS), chilling acclimation (CA) and chilling after chilling acclimation (CCA). (A) The numbers of expressed and differentially expressed (DE) genes and miRNAs across the four conditions. The two numbers in an oval are the numbers of expressed genes (the first line) and miRNAs (the second line). The two numbers on an edge are the numbers of DE genes and DE miRNAs between two conditions. (B) Relationship between the up- and down-regulated genes and that of miRNAs of CS and CA with respect to NC. The two numbers within a region are the numbers of DE genes (the first line) and miRNAs (the second line). The figure shows a substantial overlapping between the up-regulated genes (and miRNAs) and overlapping between the down-regulated genes (and miRNAs) of CS and CA. (C) Similar to (B); relationship between the up- and down-regulated genes and that of miRNAs when going from NC to AC and then from AC to ACC. The figure shows a little overlapping between the up-regulated genes (and miRNAs) and overlapping between the down-regulated genes (and miRNAs) in the comparison.