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Figure 3 | BMC Plant Biology

Figure 3

From: Fragments of the key flowering gene GIGANTEA are associated with helitron-type sequences in the Pooideae grass Lolium perenne

Figure 3

Diagrammatic representation and sequence details of alignments between Lp GT sequences and Lp -psGI.2, indicating possible ancestral 5' (left) and 3' (right) helitron borders.Diagram: sequence within helitron borders conserved (thick black bar) and not conserved (thin black bar) between Lp-psGI.1 and Lp-psGI.2; non-helitron genomic sequence (thin grey bar). LpGT sequences homologous (thick grey bar) and non-homologous (thick white bar) with Lp-psGI.2. Sequence details: alignments between Lp-psGI.2 and LpGT sequences showing potential A↓T helitron insertion sites; these indicate possible ancestral 3' and 5' borders for different helitron insertion events and also mark the borders of Lp-psGI.1 and Lp-psGI.2 homology. LpGT sequences: a) FLPB002289H22-b0FSP_20020409, b) FLPB002413G09-b0FSP_20011203, c) FLPB002264M19-g0RSP_20011109, d) FLPB002078I09-b0FSP_20010827, e) FLPB002029F17-g1RSP_20010827 (see Additional File 5).

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BMC Plant Biology

ISSN: 1471-2229

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