Table 4 Differentially expressed genes in LA1589 sun NILs
| Â | Gene ID* | Fold Changes | Gene annotation | Category |
|---|---|---|---|---|
Flower bud | Â | Â | Â | Â |
| Â | TC119205 | -2.0 | Defensin, DEFL2 | Defense response |
Flower | Â | Â | Â | Â |
| Â | TC119205 | -3.4 | Defensin, DEFL2 | Defense response |
| Â | TC123918 | -1.6 | Pyridoxal 5'-phosphate-dependant histidine decarboxylase | Metabolism |
| Â | TC120795 | -1.5 | Harpin-induced protein 1 (Hin1) (AT5G11890). | Unknown |
| Â | TC130586 | -1.5 | Putative GPI protein (At5g53870) | Energy pathways |
| Â | TC118655 | -1.5 | Unknown | Unknown |
| Â | TC129091 | -1.5 | Weakly similar to potato resistance gene cluster AF265664. | Defense response |
| Â | TC119275 | -1.5 | Auxin-responsive family protein (AT3G25290) | Developmental processes |
| Â | TC128245 | -1.5 | Hypothetical protein | Unknown |
| Â | TC131486 | -1.5 | Hypothetical protein | Unknown |
| Â | TC121636 | -1.5 | Unknown | Unknown |
| Â | TC130702 | -1.4 | Plant thionin family protein (AT1G12663) | Unknown |
| Â | TC122761 | -1.4 | Unknown | Unknown |
| Â | TC116706 | -1.4 | Unknown | Unknown |
| Â | TC123023 | -1.4 | Plastocyanin-like domain-containing protein (AT5G53870) | Energy pathways |
| Â | TC126072 | 1.4 | DNAJ-LIKE 20 (At4g13830) | Metabolism |
| Â | TC120357 | 1.4 | Universal stress protein (USP) family protein (At3g62550) | Stress response |
| Â | TC127119 | 1.4 | Thiamine biosynthesis family protein/thiC family protein (AT2G29630) | Biosynthetic process |
| Â | TC124373 | 1.4 | Unknown protein (AT4G32480) | Unknown |
| Â | TC131247 | 1.4 | alternative oxidase 2 (AT5G64210) | Energy pathways |
| Â | TC116590 | 1.4 | 60S ribosomal protein L6 (RPL6A) (AT1G18540) | Biosynthetic process |
| Â | TC125885 | 1.5 | MEE59 (maternal effect embryo arrest 59) (AT4g37300) | Developmental processes |
| Â | TC127729 | 1.5 | ALPHA-CRYSTALLIN DOMAIN 31.2 (At1g06460 mRNA) | Stress response |
| Â | TC116513 | 1.5 | Single-stranded DNA binding protein precursor (AT2G37220) | Stress response |
| Â | TC123370 | 1.6 | HEPTAHELICAL TRANSMEMBRANE PROTEIN1 (AT5g20270) | Developmental processes |
| Â | TC124422 | 1.7 | Phi-1. Arabidopsis thaliana phosphate-responsive protein (EXO) | Developmental processes |
| Â | TC116452 | 1.8 | Pectin methylesterase inhibitor isoform (AT5G62360) | Metabolism |
Fruit | Â | Â | Â | Â |
| Â | TC119205 | -2.9 | Defensin, DEFL2 | Defense response |
| Â | TC130680 | -1.5 | unknown | Unknown |
| Â | TC116444 | -1.4 | Auxin/aluminum-responsive protein (AT4G27450) | Unknown |
| Â | TC122863 | -1.4 | Sulfate transporter (AT3G51895) | Transport |
| Â | TC122115 | 1.4 | proteinase inhibitor isoform | Stress response |
| Â | TC126601 | 1.4 | Gty37 protein; putative cell wall protein (AT2G20870) | Unknown |
| Â | TC124142 | 1.4 | 2OG-Fe(II) oxygenase family (AT2G36690) | Biosynthetic process |
| Â | TC123957 | 1.4 | THI1 protein (AT5G54770) | Biosynthetic process |
| Â | TC123969 | 1.4 | Late embryogenesis abundant protein | Developmental processes |
| Â | TC125885 | 1.6 | MEE59 (maternal effect embryo arrest 59) (AT4g37300) | Developmental processes |