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Table 3 List of the 15 most common fungal rust contigs containing the highest number of sequences

From: Generation of Phaseolus vulgaris ESTs and investigation of their regulation upon Uromyces appendiculatus infection

Total ESTs in contig Contig annotation genus gene annotation *
18 CL1Contig467 Phakopsora pachyrhizi cDNA from germinating urediniospores SSH-library similar to beta-galactosidase
14 CL229Contig1 Uromyces viciae haustorium-specific cDNA similar to mitochondrial substrate carrier
14 CL201Contig1 Uromyces appendiculatus cDNA from hyphae from gernimating uredospore similar to translation elongation factor
14 CL1Contig310 Uromyces appendiculatus cDNA from hyphae from gernimating uredospore similar to von Willebrand factor
12 CL1Contig460 Phakopsora pachyrhizi cDNA from germinating urediniospores SSH-library similar to von Willebrand factor
10 CL124Contig1 Uromyces appendiculatus cDNA from hyphae from gernimating uredospore similar to unknown
10 CL116Contig1 Uromyces appendiculatus cDNA from hyphae from gernimating uredospore similar to unnknown
10 CL492Contig1 Uromyces appendiculatus cDNA from hyphae from gernimating uredospore similar to unknown
8 CL633Contig1 Uromyces viciae haustorium-specific cDNA similar to nucleotide excision repair protein yeast rad23
8 CL662Contig1 Uromyces viciae haustorium-specific cDNA similar to 6-phosphogluconate dehydrogenase
8 CL116Contig2 Uromyces appendiculatus cDNA from hyphae from gernimating uredospore similar to unknown
8 CL766Contig1 Puccinia graminis f. sp. tritici SSH-library of Puccinia graminis infected wheat leaves similar to 60s ribosomal protein L5 gene
8 CL772Contig1 Uromyces viciae haustorium-specific cDNA similar to voltage-dependent ion-selective channel
8 CL582Contig1 Puccinia graminis f. sp. tritici SSH-library of Puccinia graminis infected wheat leaves similar to glutathione S-transferase
8 CL787Contig1 Uromyces appendiculatus cDNA from hyphae from gernimating uredospore similar to cysteine-rich secretory protein (CRISP/SCP/TPX1)
  1. * Based on the BlastX hits (E value > e -20) with fungal ESTs
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BMC Plant Biology

ISSN: 1471-2229

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