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Table 1 The nine chromosome 11 and 12 paralogous pairs sequenced in Oryza species

From: A recent duplication revisited: phylogenetic analysis reveals an ancestral duplication highly-conserved throughout the Oryza genus and beyond

A

Os11g01154

217

96233-98565

Os12g01160

217

92201-94423

137

Trans-2-enoyl-CoA reductase

B

Os11g01380

597

233285-243004

Os12g01390

594

248725-258395

228

Clathrin heavy chain binding

C

Os11g01420

304

253787-251730

Os12g01430

302

269040-266954

92

mRNA turnover protein 4

D

Os11g03050

736

1053217-1058699

Os12g02820

735

1009926-1005023

326

Ethanolamine-phosphate cytidylyltransferase

E

Os11g03730

663

1453355-1458633

Os12g03470

680

1359377-1365215

120

Alpha-L-arabinofuranosidase C-terminus

F

Os11g04030

626

1630227-1625740

Os12g03860

427

1587934 -1583402

188

Major facilitator superfamily antiporter

G

Os11g04200

494

1711766-1707219

Os12g04010

495

1667882-1663261

297

M-phase phosphoprotein 10

H

Os11g04740

1289

2020022-2015978

Os12g04520

1294

1925626-1921577

283

L-Galactono,4-lactone dehydrogenase

I

Os11g04980

880

2136990-2128145

Os12g04990

792

2089033-2088254

102

AMP-binding enzyme family

  1. The genes in bold were amplified on the complete sample set whereas the others were amplified on the more distant species only. CDS size is given for the multiple alignement of codons sequences.