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Table 5 Counting of ESTs/TCs mapped along tomato and potato genomic sequences.

From: SolEST database: a "one-stop shop" approach to the study of Solanaceae transcriptomes

   mapped on TOMATO mapped on POTATO mapped on TOMATO and/or POTATO
SOURCE TOTAL (ESTs/TCs) # total (ESTs/TCs) # multiple matches (ESTs/TCs) # single matches (ESTs/TCs) # total (ESTs/TCs) # multiple matches (ESTs/TCs) # single matches (ESTs/TCs) only TOMATO (ESTs/TCs) only POTATO (ESTs/TCs) TOMATO & POTATO (ESTs/TCs)
CAPAN 33311/4293 3015/365 805/89 2210/276 1051/117 258/24 793/93 2585/307 621/59 430/58
CAPCH 372/34 41/3 20/3 21/0 23/2 3/1 20/1 35/3 17/2 6/
COFAR 1577/137 30/3 10/1 20/2 30/3 8/0 22/3 1/3 1/ 29/3
COFCA 55694/6620 73/7 51/6 22/1 58/7 42/5 16/2 22/1 7/1 51/6
NICAT 329/32 16/0 8/0 8/0 14/0 4/0 10/0 7/0 5/0 9/0
NICBE 42566/5006 1016/80 363/20 653/60 499/37 102/11 397/26 764/60 247/17 252/20
NICLS 12448/1379 207/27 64/7 143/20 106/10 37/1 69/9 163/23 62/6 44/4
NICSY 8583/674 546/52 140/17 406/35 215/19 49/5 166/14 464/46 133/13 82/6
PETHY 14017/1738 37/278 12/64 25/214 12/119 1/22 11/97 33/227 8/68 4/51
SOLCH 7752/637 1068/117 262/29 806/88 469/58 107/10 362/48 925/103 326/44 143/14
SOLHA 8000/1243 1996/346 658/99 1338/247 600/99 194/15 406/84 1786/306 390/59 210/40
SOLLC 259990/20548 86547/6184 24129/1576 62418/4608 22126/1409 4985/299 17141/1110 76161/5485 11740/710 10386/699
SOLLP 1008/109 42/0 13/0 29/0 9/0 2/0 7/0 39/0 6/0 3/0
SOLPN 8346/844 2731/269 766/77 1965/192 772/66 100/14 672/52 2425/240 466/37 306/29
SOLTU 231275/23453 48264/4314 12936/1096 35328/3218 22189/1974 5454/458 16735/1516 41371/3693 15296/1353 6893/621
TOBAC 240440/28571 8171/499 2310/123 5861/376 3686/247 977/58 2709/189 6516/392 2031/140 1655/107
  1. The total number of ESTs/TCs for each Solanaceae species collected in the SolEST database is shown in the first two columns. The number of ESTs/TCs splice-aligned along BACs, the number of ESTs/TCs mapped more than once and the number of EST/TC single matches is reported for the tomato and potato genomes, respectively. In addition, the table lists the number of ESTs/TCs exclusively mapped onto the tomato or potato genome and, finally, the number of ESTs/TCs splice-aligned along both the genomes.