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Table 4 Statistics on UniProtKB-based annotations.

From: SolEST database: a "one-stop shop" approach to the study of Solanaceae transcriptomes

Unique transcripts with matches in UniProt
SOURCE CAB DFCI PGDB SGN
SOLLC 28737 (55.82%) 27240 (58.1%) 27763 (56.7%) 20720 (59.4%)
SOLPN 2319 (58.65%) - 2169 (58.3%) -
SOLHA 2652 (67.14%) - 2690 (66.8%) -
SOLLP 483 (68.71%) - - -
SOLTU 39201 (54.38%) - 37920 (53.9%) 17122 (55.1%)
SOLCH 4163 (60.19%) - 4062 (57.1%)  
TOBAC 45647 (41.5%) 30958 (37.26%) 46618 (40.83%) 33415 (39.5%)
NICBE 8108 (43.15%) 7631 (47.32%) 8564 (47.48%) 7239 (45.18%)
NICSY 3930 (52.3%) - 4030 (52.9%) 3512 (55.7%)
NICAT 177 (46.09%) - - -
NICLS 3116 (49.09%)   3391 (49.9%) -
CAPAN 8457 (52.83%) 7947 (55.7%) 8454 (55.3)% 5723 (59.90%)
CAPCH 311 (73.52%) - - -
PETHY 5041 (53.9%) 4999 (57.27%) 5474 (55.3%) 2967 (57.7%)
COFCA 9896 (51.14%) 9464 (53.6%) 10697 (53.0%) 8316 (52.9%)
COFAR 701 (49.79%) - 530 (48.49%) -
  1. The table shows the number of sequences with significant matches to the UniProtKB/Swiss-prot database and, in brackets, the corresponding percentage on the total.
  2. Source: SOLLC: S. lycopersicum; SOLPN: S. pennellii; SOLHA: S. habrochaites; SOLLP: S. lycopersicum × S. pimpinellifolium; SOLTU: S. tuberosum; SOLCH: S. chacoense; TOBAC: N. tabacum; NICBE: N. benthamiana; NICSY: N. sylvestris; NICAT: N. attenuata; NICLS: N. langsdorffii × N. sanderae; CAPAN: C. annuum; CAPCH: C. chinense; PETHY: Petunia × hybrida; COFCA: C. canephora; COFAR: C. arabica.CAB: Computer Aided Bioscience group http://cab.unina.it collection; DFCI: The DFGI Gene Index Project http://compbio.dfci.harvard.edu/tgi/; PGDB: Plant Genome Database http://www.plantgdb.org/; SGN: The unigene collection at Solanaceae Genomics Network http://www.sgn.cornell.edu/).