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Table 2 Simple Sequence Repeats (SSR) summary statistics.

From: SolEST database: a "one-stop shop" approach to the study of Solanaceae transcriptomes

  # sequences analysed #SSRs identified # SSR-containing sequences #sequences containing >1 SSR
SOLLC 265760 9636 8758 698
SOLPN 8359 360 349 10
SOLHA 8030 400 367 27
SOLLP 1008 17 15 2
SOLTU 232979 12364 10591 1551
SOLCH 7812 362 321 30
TOBAC 244045 9875 8434 958
NICBE 42867 2109 1880 197
NICSY 8677 0 0 0
NICAT 423 11 11 0
NICLS 12543 278 265 10
CAPAN 33875 1386 1271 108
CAPCH 477 14 13 1
PETHY 14340 454 420 27
COFCA 55794 3173 2936 200
COFAR 1727 142 121 15
Σ 938716 40581 35752 3834
  1. Source: SOLLC: S. lycopersicum; SOLPN: S. pennellii; SOLHA: S. habrochaites; SOLLP: S. lycopersicum × S. pimpinellifolium; SOLTU: S. tuberosum; SOLCH: S. chacoense; TOBAC: N. tabacum; NICBE: N. benthamiana; NICSY: N. sylvestris; NICAT: N. attenuata; NICLS: N. langsdorffii × N. sanderae; CAPAN: C. annuum; CAPCH: C. chinense; PETHY: Petunia × hybrida; COFCA: C. canephora; COFAR: C. arabica.
  2. For each species we show the number of the sequences analysed, the number of the microsatellites identified, the total of the SSR-containing sequences and the amount of sequences containing more than one SSR.