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Table 3 List of enzymes involved in carbon fixation, starch and sucrose metabolism, glycolysis and gluconeogenesis along with the library of origin of the correspondent EST clones.

From: Computational annotation of genes differentially expressed along olive fruit development

Enzyme

Enzyme Id

Library

Metabolic pathways *

   

G

C

P1

P2

F

S

Py

Cf

A

Alcohol dehydrogenase

ec:1.1.1.1

A

X

        

Malate dehydrogenase

ec:1.1.1.37

C

 

X

    

X

X

 

Malate dehydrogenase

ec:1.1.1.40

B-C

      

X

X

 

Glyceraldehyde-3-phosphate dehydrogenase

ec:1.2.1.12

B-C

X

        

Glyceraldehyde-3-phosphate dehydrogenase

ec:1.2.1.13

D

       

X

 

Pyruvate dehydrogenase

ec:1.2.4.1

B-D

X

     

X

  

Monodehydroascorbate reductase

ec:1.6.5.4

D

        

X

Dihydrolipoyl dehydrogenase

ec:1.8.1.4

B

X

X

    

X

  

Transketolase

ec:2.2.1.1

B-D

  

X

    

X

 

Citrate (Si)-synthase

ec:2.3.3.1

A

 

X

       

ATP citrate synthase

ec:2.3.3.8

A

 

X

       

Phosphorylase

ec:2.4.1.1

A

     

X

   

Cellulose synthase

ec:2.4.1.12

A

     

X

   

6-phosphofructokinase

ec:2.7.1.11

B-D

X

 

X

 

X

    

Pyruvate kinase

ec:2.7.1.40

B-C

X

     

X

X

 

Diphosphate-fructose-6-phosphate 1-phosphotransferase

ec:2.7.1.90

B-D

    

X

    

Phosphoglycerate kinase

ec:2.7.2.3

B

X

      

X

 

Glucose-1-phosphate adenylyltransferase

ec:2.7.7.27

A

     

X

   

Pyruvate, phosphate dikinase

ec:2.7.9.1

B

      

X

X

 

Carboxylesterase

ec:3.1.1

D

X

   

X

  

X

 

Pectinesterase

ec:3.1.1.11

D

   

X

 

X

   

Polygalacturonase

ec:3.2.1.15

B

   

X

 

X

   

Beta-amylase

ec:3.2.1.2

A

     

X

   

Beta-glucosidase

ec:3.2.1.21

B

     

X

   

Alpha, alpha-trehalase

ec:3.2.1.28

C

     

X

   

6-phospho-beta-glucosidase

ec:3.2.1.86

C

X

        

Phosphoenolpyruvate carboxykinase

ec:4.1.1.49

D

 

X

    

X

X

 

Phosphopyruvate hydratase

ec:4.2.1.11

B-C

X

        

Pectate lyase

ec:4.2.2.2

A

   

X

     

GDP-mannose 3,5-epimerase

ec:5.1.3.18

B

        

X

Triose-phosphate isomerase

ec:5.3.1.1

D

X

   

X

  

X

 

Xylose isomerase

ec:5.3.1.5

D

   

X

X

    

Acetyl-CoA carboxylase

ec:6.4.1.2

B-C

      

X

  

Number of identified enzymes

11

5

2

4

5

8

8

10

2

  1. * G: Glycolysis and gluconeogenesis; C: Citrate cycle (TCA cycle); P1: Pentose phosphate pathway; P2: Pentose and glucuronate interconversions; F: Fructose and mannose metabolism; S: Starch and sucrose metabolism; Py: Pyruvate metabolism; Cf: Carbon fixation; A: Ascorbate and aldarate metabolism
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BMC Plant Biology

ISSN: 1471-2229

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