Table 1 Microsatellite markers, Sequence sources and original data
Marker acronym used by the authors | Sequence type | Sequence origin (Coffea) | No of markers | Reference | Taxa tested | |
|---|---|---|---|---|---|---|
CofEST-SSR | EST | C. canephora × C. congensis | 9 | (Bhat et al., 2005) | [24] | 11 Coffea sp. 4 Psilanthus sp. |
ES | EST | C. canephora | 99 | (Poncet et al., 2006) | [2] | 7 Coffea sp. |
Present study | 21 Rubiaceae sp. | |||||
SSR | EST | C. canephora | 10 | (Geromel et al., 2006) | [9] | C. arabica |
DCM/CofEST-SSR | EST | C. sp. | 9 | (Aggarwal et al., 2007) | [7] | 11 Coffea sp. 4 Psilanthus sp. |
Ssr | EST | C. canephora | 132 | (Crouzillat et al., unpublished data) | ||
Present study | 3 Coffea sp. | |||||
M | Genomic | C. arabica | 10 | (Combes et al., 2000) | [25] | |
M | Genomic | C. arabica | 17 | (Coulibaly et al., 2003) | [11] | 2 Coffea sp. |
CM | Genomic | C. arabica | 9 | (Baruah et al., 2003) | [26] | 11 Coffea sp. 4 Psilanthus sp. |
CFGA | Genomic | C. arabica | 34 | (Moncada et al., 2004) | [27] | C. arabica |
M | Genomic | C. arabica | 77 | (Poncet et al., 2004) | [13] | 6 Coffea sp. |
DL | Genomic | C. canephora | 8 | (Leroy et al., 2005) | [19] | C. canephora |
M | Genomic | C. canephora | 213 | (Poncet et al., 2007) | [1] | 3 Coffea sp. |
Genomic | C. arabica | 9 | (Lashermes et al., unpublished data) | |||
Total | 638 |