Skip to main content
Figure 3 | BMC Plant Biology

Figure 3

From: MoccaDB - an integrative database for functional, comparative and diversity studies in the Rubiaceaefamily

Figure 3

Screenshots of sequence/putative function MoccaDB result pages. Sequences can be searched by name, putative annotation. The search can be restricted using different criteria such as sequence origin or marker type. The group of screenshots shows an example sequence search using the keyword 'transferase' to find out what sequences have been "putatively" annotated with this term. (A) The result page displays sequences and related data resulting from searching for the annotation term 'transferase'. The tabular text summary lists all the sequences found, each line in the table presenting the sequence name and related information (sequence type and origin, marker name and BLAST annotation). The marker name and sequence name are respectively linked to the marker detail page (C) and to the sequence detail page (B). The user can select sequences and export them in FASTA format. The sequence detail page (B) displays all the associated information for that sequence which includes general information (e.g.: sequence type, DNA bank), annotation information, marker information and publications related to that sequence. Hyperlinks give access to associated data within MOCCAdb such as markers, DNA bank or link to external resources such as SOL or NCBI.

Back to article page