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Table 1 The comparison of F. vesca ESTs with different databases.

From: Identification of flowering genes in strawberry, a perennial SD plant

  

WT

EB

  

number

average length

number

average length

A)

Raw

1172

946

1344

965

 

Poor Quality

202

1037

160

1066

 

Singletons/ESTs

970

452

1184

451

  

number

%

number

%

B)

Arabidopsis

695

72

781

66

 

Swissprot

483

50

570

48

 

Non-redundant

749

77

852

72

 

In all 3 datab.

752

78

862

73

C)

Malus

741

76

874

74

 

Oryza

689

71

807

68

 

Vitis

666

69

761

64

 

Populus

829

85

928

78

D)

No protein hits

218

22

322

27

 

No Fragaria hits

370

38

454

38

  1. Average numbers, lengths and percentages of ESTs from EB and SD genotypes. A) numbers and average lengths of raw and poor quality ESTs, and singletons, B) numbers and percentages of BLASTx hits against protein databases, C) numbers and percentages of tBLASTx hits against TIGR plant transcript assemblies of Malus x domestica, Oryza sativa and Vitis vinifera and against Populus genome database, D) numbers and percentages of novel ESTs.