Cumulative length (bp) | Fraction of 1RS (%) | |||
---|---|---|---|---|
Class I elements | 1,306,781 | 64.3 | ||
LTR retrotransposons | 1,275,443 | 62.8 | ||
Gypsy | 989,195 | 48.7 | ||
Copia | 281,937 | 13.9 | ||
TRIM | 265 | 0.0 | ||
Non-LTR retrotransposons | 31,338 | 1.5 | ||
LINE | 23,400 | 1.2 | ||
SINE | 1,877 | 0.1 | ||
Class II elements | 100,854 | 5.0 | ||
CACTA | 90,323 | 4.4 | ||
Mutator | 1,394 | 0.1 | ||
MITE | 4,681 | 0.2 | ||
LITE | 2,753 | 0.1 | ||
Unclassified elements | 30,340 | 1.5 | ||
Other known repeats | 106,376 | 5.2 | ||
Ribosomal genes | 94,665 | 4.7 | ||
Simple repeats | 5,049 | 0.2 | ||
Tandem repeats | 6,662 | 0.3 | ||
Known repeats | 1,536,587 | 75.6 | ||
Unknown repeats | 178,027 | 8.8 | ||
Total | 1,712,364 | 84.2 |