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Table 1 Summary of small RNA pool in 0 to 10 days post anthesis (DPA) developing ovules of cotton, G. hirsutum L.

From: Small RNA regulation of ovule development in the cotton plant, G. hirsutumL

Small RNA library

No. of unique small RNA sequences*

NUS (#)

GIS (#)

OTS (%)

NCS (#)

 

≥ 26 nt

25 nt

24 nt

23 nt

22 nt

21 nt

20 nt

19 nt

18 nt

17–12 nt

    

0 dpa

2

5

72

16

7

3

1

1

-

4

111

223

58

576

1 dpa

2

6

58

12

5

1

1

-

-

3

88

203

53

480

2 dpa

3

4

79

20

12

9

3

-

2

1

133

276

61

747

3 dpa

-

2

20

2

2

3

-

3

-

2

34

325

29

530

4 dpa

-

4

25

4

-

1

1

-

-

-

35

241

20

506

5 dpa

1

-

28

13

7

2

1

-

-

1

53

288

23

708

6 dpa

-

2

13

5

3

1

1

1

-

-

26

233

42

354

7 dpa

1

3

14

2

1

2

2

-

1

1

27

216

41

663

8 dpa

1

3

21

4

1

-

-

-

-

2

32

208

22

779

9 dpa

1

-

1

1

1

-

-

-

-

1

5

48

20

927

10 dpa

-

1

31

4

1

-

-

1

-

1

39

221

18

421

Total

11

30

362

83

40

22

10

6

3

16

583

2482

44

6691

  1. * #10 nt inserts were not included.
  2. NUS – Number of unique small RNAs per library.
  3. GIS – Number of all good insert sequences per each library (≥12 nt).
  4. OTS – Number of one-time sequenced small RNAs (%) per each library.
  5. NCS – Number of clones sequenced per each library.