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Table 5 Comparison of changes in gene expression between NaCl-treated WT and ABR17 transgenic Arabidopsis seedlings.

From: Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana

AGIa

Operon annotation

ABR17

SEb

WT

SEb

ABR17-WT

p value

  

log2 ratio

 

log2 ratio

   

At4g25810

Xyloglucan endotransglycosylase (XTR-6)

4.68

0.39

2.35

1.31

2.33

6.47E-03

At3g02480

ABA-responsive protein-related

4.55

1.11

2.4

0.6

2.15

1.16E-02

At1g43160

AP2 domain transcription factor RAP2.6

4.52

0.87

1.67

0.6

2.85

1.55E-02

At5g24640

Unknown protein

4.15

0.28

2.58

0.36

1.57

7.00E-03

At4g33720

Pathogenesis-related protein, putative

3.54

0.89

1.19

0.77

2.35

8.68E-04

At3g47340

Glutamine-dependent asparagine synthetase

2.04

0.12

-0.02

0.45

2.06

8.68E-04

At2g29500

Small heat shock protein -related

1.69

0.93

-0.21

0.61

1.91

2.98E-03

At1g59860

Heat shock protein, putative

1.59

0.8

-1.59

1.03

3.17

2.10E-04

At5g12030

A. thaliana mRNA for 17.6kDa HSP protein

1.41

0.39

-0.7

0.81

2.11

1.82E-03

At5g51440

Heat shock protein, putative

1.32

0.6

0.08

0.3

1.24

2.78E-03

At3g09440

Heat shock protein hsc70-3 (hsc70.3)

1.22

0.24

-3.03

0.53

4.25

1.98E-06

At5g56010

Heat shock protein, putative

1.19

0.35

-1.06

0.36

2.26

1.57E-06

At2g26150

Heat shock transcription factor family

1.06

0.59

-0.55

0.69

1.62

1.73E-03

At1g74310

Heat shock protein 101 (HSP101)

1.06

0.27

-2.42

0.75

3.48

4.04E-05

At5g48570

Peptidylprolyl isomerase

1.02

0.3

-2.18

0.91

3.19

1.84E-04

At5g44420

Plant defensin protein, putative (PDF1.2a)

0.9

0.23

-2.51

0.51

3.41

5.74E-06

At5g44430

Plant defensin protein, putative (PDF1.2c)

0.8

0.25

-2.62

0.42

3.42

1.38E-07

At5g56030

Heat shock protein 81-2 (HSP81-2)

0.77

0.17

-1.52

0.34

2.29

1.46E-06

At2g26010

Plant defensin protein, putative (PDF1.3)

0.76

0.2

-2.95

0.38

3.7

1.38E-07

At3g12580

Heat shock protein hsp70

0.73

0.44

-1.93

1.1

2.66

1.55E-03

At5g56000

Heat shock protein 81.4 (hsp81.4)

0.64

0.2

-1.91

0.57

2.55

5.05E-05

At5g12020

Class II heat shock protein

0.61

0.29

-0.41

0.49

1.01

2.58E-03

At1g75830

Plant defensin protein, putative (PDF1.1)

0.58

0.16

-1.72

0.51

2.3

4.23E-05

At4g11660

Heat shock factor protein 7 (HSF7)

0.53

0.35

-0.77

0.75

1.3

6.99E-03

At5g02500

Heat shock protein hsc70-1 (hsp70-1)

0.52

0.16

-0.75

0.24

1.27

4.52E-06

At5g02490

Heat shock protein hsc70-2 (hsc70.2)

0.43

0.13

-1

0.27

1.43

7.67E-06

At2g19310

Small heat shock protein -related

0.39

0.22

-1.98

0.44

2.37

8.50E-06

At1g16030

Heat shock protein hsp70b

0.34

0.26

-0.77

0.22

1.11

1.42E-04

At2g04460

Retroelement pol polyprotein -related

-3.15

0.56

1.55

0.63

-4.7

5.32E-06

  1. Footnote: All expression ratios are significant (α = 0.05) and in a log2 scale where fold change is salt treated ABR17/control ABR17 and salt treated WT/control WT.
  2. ABR17- WT = Difference in log2 ratio of salt treated ABR17/control ABR17 and salt treated WT/control WT.
  3. AGIa– Arabidopsis Genome Initiative SEb– Standard error
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BMC Plant Biology

ISSN: 1471-2229

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