Table 2 Predicted rice GH family 35 β-galactosidase protein properties and locations.
From: Genomic and expression analysis of glycosyl hydrolase family 35 genes from rice (Oryza sativa L.)
Gene Name | Gene Locus (NCBI, RGP) | Pre-protein | Mature Protein | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Â | Â | MWa (kDa) | AAb | Cleavage sitec | MWa | AAb | pIa | N-gly sited | Possible destinatione |
OsBgal1 | Os03g0165400 | 92.2 | 841 | 25–26 | 89.8 | 816 | 5.78 | 2 | Gol, Vac, ER ext |
OsBgal2 | Os06g0573600 | 78.3 | 715 | 20–21 | 76.5 | 695 | 7.65 | 0 | Gol, PM, IMP, MII, ER ext |
OsBgal3 | Os01g0580200 | 91.5 | 827 | 24–25 | 89.5 | 803 | 5.59 | 2 | Gol, PM, IMP, MII, ER, Sec |
OsBgal4 | Os01g0875500 | 94.7 | 851 | 29–30 | 91.7 | 822 | 6.76 | 6 | Gol, Cis-Gol, MII, ER, Sec |
OsBgal5 | Os01g0533400 | 91.7 | 827 | 25–26 | 88.9 | 802 | 5.66 | 8 | Gol, MII, ER |
OsBgal6 | P0636F09.15 | 90.6 | 811 | 17–18 | 88.9 | 794 | 6.61 | 5 | IMP, MC in, Sec, Cy, N |
OsBgal7 | Os02g0219200 | 78 | 729 | 36–37 | 76.8 | 693 | 8.71 | 0 | Gol, MII, ER, Sec |
OsBgal8 | Os03g0255100 | 103.7 | 956 | 62–63 | 96.5 | 894 | 5.62 | 7 | PM, IMP, ER, Sec |
OsBgal9 | Os05g0539400 | 75.7 | 673 | 20–21 | 73.5 | 653 | 5.57 | 6 | Vac-Lys, IMP, MC in, Per, ERl, N, Sec, Cy |
OsBgal10 | Os08g0549200 | 94.7 | 848 | 23–24 | 92.8 | 825 | 9.1 | 5 | Vac-Lys, PM, IMP, MC in, ER, Cy, Sec |
OsBgal11 | Os09g0539200 | 94.11 | 838 | 25–26 | 91.9 | 813 | 6.52 | 3 | Vac-Lys, Gol, PM, IMP, MII, Mic, ER, MC in, Sec |
OsBgal12 | Os10g0330600 | 92 | 828 | 23–24 | 89.7 | 805 | 6.07 | 10 | Gol, MII, ER, Sec |
OsBgal13 | Os12g0429200 | 101.0 | 919 | 31–32 | 97.9 | 888 | 5.56 | 5 | IMP, ER, Sec |
OsBgal14 | J090043H02 | 92.2 | 828 | 28–29 | 89.6 | 800 | 5.99 | 9 | PM, IMP, MII, ER, Sec |
OsBgal15 | AP004733 | 89.6 | 809 | 23–24 | 87.3 | 789 | 6.17 | 8 | Gol, MII, ER, Sec |